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Job DescriptionP76556
Confidence98.21%DateThu Jan 5 12:24:35 GMT 2012
Rank280Aligned Residues132
% Identity21%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30....
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Query Sequence  KRIAFVGSVGAGKTTLFNALQGNYTLARKTQAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKA
Template Known Secondary structure 

TTS
TTT




TT
TT



STT

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   294.....300.........310.........320.........330.........340.........350.........360.........370...
 
   35....40.........50.........60...... ...70.........80.........90.........100......
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Query Sequence  EFNDKGDIDTPGEYFNHPRWYHALITTLQDVD. . . . . . . . MLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDA
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Template Sequence  RNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAK
Template Known Secondary structure  TT
S




GGGTTT
TT

SGGGTS




TT
TT
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   374.....380.........390.........400.........410.........420.........430.........440.........450...
 
   107..110.........120.........130........
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Query Sequence  DVAATRKLLLETGFEEPMFELNSHDPQSVQQL
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Template Sequence  GGVIFSVADQFG. . . IPIRYIG. . VGERIEDL
Template Known Secondary structure  TT
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SSSGGG
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   454.....460..... ....470.. .......480
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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