Job Description P76556 Confidence 99.81% Date Thu Jan 5 12:24:35 GMT 2012 Rank 48 Aligned Residues 151 % Identity 12% Template c2oilA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein rab-25; PDBTitle: crystal structure of human rab25 in complex with gdp Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.										.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	T	Q	A	V	.	.	.	.	.	.	.	.	.	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G
Query Conservation																																		.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	V	L	I	G	E	S	G	V	G	K	T	N	L	L	S	R	F	T	R	N	E	F	S	H	D	S	R	T	T	I	G	V	E	F	S	T	R	T	V	M	L	G	T	A	A	V	K	A	Q	I	W	D	T	A	G	L	E	R	Y	R	A	I	T	S	A	Y	Y	R	G	A	V	G	A	L	L	V	F	D
Template Known Secondary structure							S	S	T	T	S	S											S				S	S					S	S											T	T											S				T	T		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																.
Query SS confidence																		.	.	.	.	.	.																.
Query Sequence		A	N	D	P	E	S	R	L	P	A	G	L	L	D	I	G	.	.	.	.	.	.	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	.	D	A	D	V	A	A	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	Q	S	V	Q	Q	L	V	D	Y	L	A	S	L	T
Query Conservation																		.	.	.	.	.	.																.
Alig confidence																		.	.	.	.	.	.																.
Template Conservation
Template Sequence		L	T	K	H	Q	T	Y	A	V	V	E	R	W	L	K	E	L	Y	D	H	A	E	A	T	I	V	V	M	L	V	G	N	K	S	D	L	S	Q	A	R	E	V	P	T	E	E	A	R	M	F	A	E	N	N	G	L	L	F	L	E	T	S	A	L	D	S	T	N	V	E	L	A	F	E	T	V	L	K	E	I
Template Known Secondary structure		T	T							T										T	T	S		T	T										G	G	G	G	G	G			S												T	T								T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		147	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	E	E	A	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	K	V	S	K	Q
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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