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Job DescriptionP76556
Confidence99.68%DateThu Jan 5 12:24:35 GMT 2012
Rank189Aligned Residues151
% Identity14%Templatec2fv8A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho-related gtp-binding protein rhob; PDBTitle: the crystal structure of rhob in the gdp-bound state
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20........ .30.........40.........50.........60.........70.........
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Query Sequence  RIAFVGSVGAGKTTLFNALQGNYTLA. RKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPES. .
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Template Sequence  KLVVVGDGACGKTCLLIVFSKDEFPFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLE
Template Known Secondary structure 
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TT
TT
TT
TTTGGGG
TT

TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   80.........90.........100.. .......110.........120.........130.........140.
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Query Sequence  . . . . RLPAGLLDIGVSKRQIAVISKTD. . . . . . . . . . . . . . MPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDY
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Template Sequence  NIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET
Template Known Secondary structure  TSTT


GGGGG
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S

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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   142.......150...
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Query Sequence  LASLTKQEEAGE
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Template Sequence  ATRAALQKRYGS
Template Known Secondary structure  S




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   174.....180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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