Job Description P76556 Confidence 99.76% Date Thu Jan 5 12:24:35 GMT 2012 Rank 122 Aligned Residues 148 % Identity 14% Template c2atvA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-like estrogen-regulated growth inhibitor; PDBTitle: the crystal structure of human rerg in the gdp bound state Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	.	.	.	.	.	.	.	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A	N
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	A	I	F	G	R	A	G	V	G	K	S	A	L	V	V	R	F	L	T	K	R	F	I	W	E	Y	D	P	T	L	E	S	T	Y	R	H	Q	A	T	I	D	D	E	V	V	S	M	E	I	L	D	T	A	G	Q	E	D	T	I	Q	R	E	G	H	M	R	W	G	E	G	F	V	L	V	Y	D	I	T
Template Known Secondary structure									T	T	S	S											S				S				T	T												T	T																											S								T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																.																															.
Query SS confidence																.	.	.	.	.	.	.																.																															.
Query Sequence		D	P	E	S	R	L	P	A	G	L	L	D	I	G	.	.	.	.	.	.	.	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	.	D	A	D	V	A	A	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	Q	S	.	V	Q	Q	L	V	D	Y	L	A	S	L	T
Query Conservation																.	.	.	.	.	.	.																.																															.
Alig confidence																.	.	.	.	.	.	.																.																															.
Template Conservation
Template Sequence		D	R	G	S	F	E	E	V	L	P	L	K	N	I	L	D	E	I	K	K	P	K	N	V	T	L	I	L	V	G	N	K	A	D	L	D	H	S	R	Q	V	S	T	E	E	G	E	K	L	A	T	E	L	A	C	A	F	Y	E	C	S	A	C	T	G	E	G	N	I	T	E	I	F	Y	E	L	C	R	E	V
Template Known Secondary structure								T													T	T	S											G	G	G	G	G	G			S													T	S							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		147	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions