Job Description P76556 Confidence 99.85% Date Thu Jan 5 12:24:35 GMT 2012 Rank 21 Aligned Residues 139 % Identity 19% Template c1zo1I_ PDB info PDB header:translation/rna Chain: I: PDB Molecule:translation initiation factor 2; PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex Resolution 13.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.										.	.	.
Query SS confidence																													.	.	.	.										.	.	.
Query Sequence		I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	.	.	.	.	T	Q	A	V	E	F	N	D	K	.	.	.	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A	N	D
Query Conservation																													.	.	.	.										.	.	.
Alig confidence																													.	.	.	.										.	.	.
Template Conservation
Template Sequence		V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	E	Y	I	R	S	T	K	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V	V	A	A	D	D
Template Known Secondary structure							S	T	T	S	S	S													S	B	T	T	B							S	S						T	T	S	S									T	T	T			T	T	S	B		S	S	S	B	S		S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure															.	.																																		.	.	.	.	.	.	.
Query SS confidence															.	.																																		.	.	.	.	.	.	.
Query Sequence		P	E	S	R	L	P	A	G	L	L	D	I	G	.	.	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	T	R	K	L	L	L	E	T	G	F	E	E	.	.	.	.	.	.	.	P	M	F	E	L	N	S	H	D	P	Q	S	V	Q	Q	L	V	D	Y	L
Query Conservation															.	.																																		.	.	.	.	.	.	.
Alig confidence															.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I
Template Known Secondary structure		B	S		T	T	T										T	T										S	S	S	S	T	T					T	T										T	T			S	S	S								T	T	T		T	T		T	T					T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions