Job Description P76556 Confidence 99.84% Date Thu Jan 5 12:24:35 GMT 2012 Rank 27 Aligned Residues 147 % Identity 18% Template c1udxA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:the gtp-binding protein obg; PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8 Resolution 2.07 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		M	K	R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	T	Q	A	V	.	.	.	.	.	.	.	.	.	.	.	.	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	.	.	.	H	A	L	I	T	T	L	Q	D	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		I	A	D	V	G	L	V	G	Y	P	N	A	G	K	S	S	L	L	A	A	M	T	R	A	H	P	K	I	A	P	Y	P	F	T	T	L	S	P	N	L	G	V	V	E	V	S	E	E	E	R	F	T	L	A	D	I	P	G	I	I	E	G	A	S	E	G	K	G	L	G	L	E	F	L	R	H	I	A	R	T
Template Known Secondary structure		S		S							G	G	G											S	S								T	T		S	S										S	S	S															G	G	G	S			S									T	S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		D	M	L	I	Y	V	H	G	A	N	D	P	E	S	R	L	P	A	G	L	L	.	.	.	.	.	.	.	D	I	G	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	Q	S	V	Q	Q	L
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																	.
Template Conservation																																																														.
Template Sequence		R	V	L	L	Y	V	L	D	A	A	D	E	P	L	K	T	L	E	T	L	R	K	E	V	G	A	Y	D	P	A	L	L	R	R	P	S	L	V	A	L	N	K	V	D	L	L	E	E	E	A	V	K	A	L	A	D	A	L	A	R	.	E	G	L	A	V	L	P	V	S	A	L	T	G	A	G	L	P	A	L
Template Known Secondary structure		S								T	T	S																							S										T	T	S														T	.	T	T	S							T	T	T		T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	Y	L	A	S	L	T	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	A	L	H	A	L	V	R	S
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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