Job Description P76556 Confidence 99.78% Date Thu Jan 5 12:24:35 GMT 2012 Rank 88 Aligned Residues 142 % Identity 22% Template c1m2oD_ PDB info PDB header:protein transport/signaling protein Chain: D: PDB Molecule:gtp-binding protein sar1; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	.	.	.	.	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A	N	D	P	E
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		K	L	L	F	L	G	L	D	N	A	G	K	T	T	L	L	H	M	L	K	N	D	R	L	A	T	L	Q	P	T	W	H	P	T	S	E	E	L	A	I	G	N	I	K	F	T	T	F	D	L	G	G	H	I	Q	A	R	R	L	W	K	D	Y	F	P	E	V	N	G	I	V	F	L	V	D	A	A	D	P	E
Template Known Secondary structure								S	T	T	S	S										T	S										S									S	S	S										S	S	G	G	G	G	T						T	T										T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence													.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		S	R	L	P	A	G	L	L	D	I	G	.	.	.	.	.	.	.	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	T	R	K	L	L	L	.	.	.	.	E	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	Q	S	V	Q	Q	L	V	D	Y	L	A	S
Query Conservation													.	.	.	.	.	.	.																												.	.	.	.
Alig confidence													.	.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		R	F	D	E	A	R	V	E	L	D	A	L	F	N	I	A	E	L	K	D	V	P	F	V	I	L	G	N	K	I	D	A	P	N	A	V	S	E	A	E	L	R	S	A	L	G	L	L	N	T	T	G	R	P	V	E	V	F	M	C	S	V	V	M	R	N	G	Y	L	E	A	F	Q	W	L	S	Q
Template Known Secondary structure		G													T		G	G	G	T	T			B			B				T	T	S	T	T											T	T		S	S						B			B			B	T	T	T	T	B	S									T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions