Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.82%DateThu Jan 5 12:24:35 GMT 2012
Rank36Aligned Residues146
% Identity17%Templatec1egaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (gtp-binding protein era); PDBTitle: crystal structure of a widely conserved gtpase era
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........50.........60......
Predicted Secondary structure 









........














........
Query SS confidence 























. . . . . . . .







































. . . . . . . .
Query Sequence  RIAFVGSVGAGKTTLFNALQGNYT. . . . . . . . LARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVD. . . . . . . .
Query Conservation 

 


    






 
     ........                                       
........
Alig confidence 























........







































........
Template Conservation   




 









 
 
  
  

    


            

   



                        
Template Sequence  FIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDV
Template Known Secondary structure 
SSSSST
S




S

SS
TTSSSS

T

TTS



Template Predicted Secondary structure 





























Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   67..70.........80.........90.........100... ......110.........120.........130.........140..
Predicted Secondary structure  ..
















..










Query SS confidence  . .




































. .






































Query Sequence  . . MLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDM. . PDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYL
Query Conservation  .. 

 
 
                         

 
 ..                        

 

 

  
   
Alig confidence  ..




































..






































Template Conservation                              
 


 




                      

 


  
 

  
   
Template Sequence  ELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIV
Template Known Secondary structure  TT


SSSS
SGGG
S
TTTS

S
TTTTTT
Template Predicted Secondary structure 















































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   143.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  ASLTKQ
Query Conservation        
Alig confidence 





Template Conservation     

 
Template Sequence  RKHLPE
Template Known Secondary structure  T

B
Template Predicted Secondary structure 


Template SS confidence 





   170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions