Job Description P32137 Confidence 99.96% Date Thu Jan 5 11:49:23 GMT 2012 Rank 2 Aligned Residues 413 % Identity 14% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	P	F	K	E	K	L	S	Y	G	I	G	D	L	A	S	N	I	L	L	D	I	G	T	L	Y	L	L	K	F	Y	T	D	V	L	G	L	P	G	T	Y	G	G	I	I	F	L	I	S	K	F	F	T	A	F	T	D	M	G	T	G	I	M	L	D	S	R	R	K	I	G	P	K	G	K	F	R	P
Query Conservation
Alig confidence																																																																								.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		Y	Y	L	K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	.	.	.	.	.	.	.	L	R	K
Template Known Secondary structure						S																																																					T												T	.	.	.	.	.	.	.	T		T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	L	Y	A	S	F	P	V	T	L	L	A	I	A	N	F	V	G	T	P	F	D	V	T	G	K	T	V	M	A	T	I	L	F	M	L	Y	G	L	F	F	S	M	M	N	C	S	Y	G	A	M	V	P	A	I	T	K	N	P	N	E	R	A	S	L	A	A	W	R	Q	G	G	A	T	L	G	L	L	L
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		Y	L	L	W	I	I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	.	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L
Template Known Secondary structure													T								T		.						T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure																							.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	V	G	F	V	P	V	M	N	L	I	E	G	N	Q	Q	L	G	Y	I	F	A	A	T	L	F	S	L	F	G	L	L	F	M	W	I	C	Y	S	G	V	K	E	R	Y	V	E	T	Q	P	A	N	P	A	Q	K	P	G	L	L	Q	S	F	R	A	I	A	G	N	R	P	L	F	I	L	C	I	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	S	I	V	G	I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S
Template Known Secondary structure																																		S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	T	L	G	A	F	N	V	K	L	A	I	Q	V	Y	Y	T	Q	Y	V	L	N	D	P	I	L	L	S	Y	M	G	F	F	S	M	G	C	I	F	I	G	V	F	L	M	P	A	S	V	R	R	F	G	K	K	K	V	Y	I	G	G	L	L	I	W	V	L	G	D	L	L	N	Y	F	F	G	G	G	S
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	.	F	A	T	S	A
Template Known Secondary structure																T	T	S	S	S																									T	T																														.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		V	S	F	V	A	F	S	C	L	A	F	F	G	S	A	F	V	N	S	L	N	W	A	L	V	S	D	T	V	E	Y	G	E	W	R	T	G	V	R	S	E	G	T	V	Y	T	G	.	F	T	F	F	R	K	V	S	Q	A	L	A	G	F	F	P	G	W	M	L	T	Q	I	G	Y	V	P	N	V	A	Q	A
Query Conservation																																																	.
Alig confidence																																.	.	.	.	.	.	.											.																									.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Sequence		L	E	V	V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	.	.	.	.	.	.	.	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	.	.	.	.	.	.	.	.
Template Known Secondary structure																														S		.	.	.	.	.	.	.	G	G	G										T	T	T																					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	T	I	E	G	L	R	Q	L	I	F	I	Y	P	S	A	L	A	V	V	T	I	V	A	M	G	C	F	Y	S	L	N	E	K	M	Y	V	R	I	V	E	E	I	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E
Template Known Secondary structure		.	.	.	.	.	.	.																							S			S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.