Return to main results Retrieve Phyre Job Id

Job DescriptionP77212
Confidence99.78%DateThu Jan 5 12:26:22 GMT 2012
Rank139Aligned Residues309
% Identity13%Templated2ivda1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  QAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNKNFH
Query Conservation 







 


 

  
   
  
 


     

                                            
Alig confidence 



































..









































Template Conservation 

 




 


  
  
   
  
 


     

..        
     
                           
Template Sequence  NVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG. . AVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIRAA
Template Known Secondary structure 


BTTT


SSSSSBT..T

TTSS


TT
TT
GGG
S
Template Predicted Secondary structure 











..



















Template SS confidence 















































































   11........20.........30.........40...... ...50.........60.........70.........80........
 
   85....90.........100.........110.........120.........130......... 140...
Predicted Secondary structure 





























.....................



Query SS confidence 






















































. . . . . . . . . . . . . . . . . . . . .



Query Sequence  NLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGI. . . . . . . . . . . . . . . . . . . . . TTTP
Query Conservation                                                         .....................    
Alig confidence 






















































.....................



Template Conservation                                                                                  
Template Sequence  DPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRHLGHRATQVLLDAVQTGI
Template Known Secondary structure 
SS



TT


ST
SSS
GGGG




TT


BT
T
Template Predicted Secondary structure 












































Template SS confidence 















































































   8990.........100.........110.........120.........130.........140.........150.........160........
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVE
Query Conservation                                                               
       

 
     
 
Alig confidence 















































































Template Conservation                                                                                
 
Template Sequence  YAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVE
Template Known Secondary structure 


TTTBB
SST



S





TT
TGGGSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   169170.........180.........190.........200.........210.........220.........230.........240........
 
   224.....230...... ...240.........250.........260... ......270.........280.........290...
Predicted Secondary structure 


..















........
















Query SS confidence 












. .


























. . . . . . . .





























Query Sequence  RISHHENQVQVHS. . EHAQLAVDALLIASGRQPATASLHPEN. . . . . . . . AGIAVNERGAIVVDKRLHTTADNIWAMGDV
Query Conservation   
        
  ..    
  
 

 
 
  
         ........        
 
 

    
    


 

 
Alig confidence 












..


























........





























Template Conservation   
                   

 

 
        

                                  

 
 


Template Sequence  GLAREGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPLDDALAALVAGIYNLGHLERVAAIDAALQRLPGLHLIGNA
Template Known Secondary structure 



TT
S
S
TTT
T

BTTTSTT
STT
Template Predicted Secondary structure 

































Template SS confidence 















































































   253......260.........270.........280.........290.........300.........310.........320.........330..
 
   294.....300.........310......
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  TGGLQFTYISLDDYRIVRDELLG
Query Conservation           
   
  

  
  
Alig confidence 




.
















Template Conservation    
 
.   

  
  

  
 
Template Sequence  YKGVG. LNDCIRNAAQLADALVA
Template Known Secondary structure  TS

S.

Template Predicted Secondary structure 




.

Template SS confidence 






















   443.... ..450.........460....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions