Phyre 2 alignment of P77212 with d1seza1

Job Description P77212
Confidence 99.78% Date Thu Jan 5 12:26:22 GMT 2012

Rank 136 Aligned Residues 298

% Identity 15% Template d1seza1

SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain

Resolution 2.90

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L	R	N	K
Query Conservation
Alig confidence			.	.																																				.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.																																				.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence	K	R	.	.	V	A	V	I	G	A	G	V	S	G	L	A	A	A	Y	K	L	K	I	H	G	L	N	V	T	V	F	E	A	E	G	K	A	G	G	.	.	K	L	R	S	V	S	Q	D	G	L	I	W	D	E	G	A	N	T	X	T	E	S	E	G	D	V	.	.	.	.	.	.	.	.	.	.	.	T	F
Template Known Secondary structure			.	.							S												T	T	S								S	S	S	S	S		S	.	.	S							T	T					S	S				B				S				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.																																				.	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	14	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.

	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	T	P	G	V	Y	D	S	T	G	L	L	N	L	K	E	L	P	.	.	.
Query Conservation																																																																														.	.	.
Alig confidence																																																																														.	.	.
Template Conservation
Template Sequence	L	I	D	S	L	G	L	R	E	K	Q	Q	F	P	L	S	Q	N	K	R	Y	I	A	R	N	G	T	P	V	L	L	P	S	N	P	I	D	L	I	K	S	N	F	L	S	T	G	S	K	L	Q	X	L	L	E	P	I	L	W	S	H	E	S	V	S	G	F	F	Q	R	H	F	G	K	E	V	V	D	Y	L
Template Known Secondary structure					T	T		G	G	G					S	S								S	S	S	S						S	S							S	S	S	S										T									B																T	T
Template Predicted Secondary structure
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

																							159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	I	D	P	F	V	A	G	T	C	G	G	D	P	D	S	L	S	X	H	H	S	F	P	E	L	W	N	L	E	K	R	F	G	S	V	I	L	G	A	I	R	S	K	L	S	K	T	S	A	N	K	K	R	Q	R	G	S	F	S	F	L	G	G	X	Q	T	L	T	D	A	I	C	K	D	L	R	E	D	E	L
Template Known Secondary structure										S			G	G	G	S	B															T	S										T	T					S			S	T	T		S		B			T	T		T									T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
	169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

	217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.													.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.											250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence	I	L	N	A	H	V	E	R	I	S	H	H	E	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	H	S	E	H	A	Q	L	A	V	D	A	L	L	I	A	.	.	.	.	.	.	.	.	.	.	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	L	N	S	R	V	L	E	L	S	C	S	C	T	E	D	S	A	I	D	S	W	S	I	I	S	A	S	P	H	K	R	Q	S	E	E	E	S	F	D	A	V	I	X	T	A	P	L	C	D	V	K	S	X	K	I	A	K	R	G	N	P	F	L	L	N	F	I	P	E	V	Y	G	H	N	Y	D	S	V	L
Template Known Secondary structure		T	T											S	S	S	S	S	S								B		S	S	S	S		B						S						S							T	S				S	S	S	S	B				T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
	259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

	275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	V	D	K	R	L	H	T	T	A	D	N	I	W	A	M	G	D	V	T	G	G	L	Q	F	T	Y	I	S	L	D	D	Y	R	I	V	R	D	E	L	L
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence	D	A	I	D	K	X	E	K	N	L	P	G	L	F	Y	A	G	N	H	R	G	G	L	S	.	V	G	K	A	L	S	S	G	C	N	A	A	D	L	V	I
Template Known Secondary structure										S	T	T						S	S	S	S		S	S	.
Template Predicted Secondary structure																									.
Template SS confidence
	451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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