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Job DescriptionP77212
Confidence99.83%DateThu Jan 5 12:26:22 GMT 2012
Rank124Aligned Residues247
% Identity17%Templated1kf6a2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20...... ...30.........40.........50.........60.........70......
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Query Sequence  MN. . KYQAVIIGFGKAGKTLAVTLAKAG. . WRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVN
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Template Sequence  MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQ
Template Known Secondary structure 

S

S
TT

SS
GGGSGGGG

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STT

TTT
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   0.........10.........20.........30.........40.........50.........60.........70.........
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  FLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKE
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Template Sequence  DVVDYFVHHCPTEM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   80.........90...
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  LPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHS
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Template Sequence  . . TQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLV
Template Known Secondary structure  ..TT



B
TTSSB

B

TT
SS


STT
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TTTTT
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   94.....100.........110.........120.........130.........140.........150.........160.........170.
 
   237..240.........250........ .260.........270.........280.........290.....
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Query Sequence  . . . . . . . EHAQLAVDALLIASGRQPATAS. . . . . . . . . . . . . LHPENAGIAVNERGAIVVDKRLHTTADNIWAMGDVTG.
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Template Sequence  AMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMGGIETDQNCETRIKGLFAVGECSSV
Template Known Secondary structure  TTTT
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GGGSSS
SS
TT
S
TTT






TTSB
SSBT
GGG
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   296...300.........310.....
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Query Sequence  . . . . . . . . GLQFTYISLDDYRIVRDELL
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Template Sequence  GLHGANRLGSNSLAELVVFGRLAGEQAT
Template Known Secondary structure  SSSTTS

TT
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   384.....390.........400.........410.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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