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Job DescriptionP77212
Confidence99.50%DateThu Jan 5 12:26:22 GMT 2012
Rank190Aligned Residues288
% Identity14%Templated1kdga1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  YQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNKNF
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Template Sequence  YDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDS. . . . . . . . . . .
Template Known Secondary structure 

STT


SS


SGGGT




GGGGGGT

TTT
GGGGGGGGT
S...........
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   217..220.........230.........240.........250.........260.........270.........280.....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  HNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGHLGI
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Template Sequence  . . . . . . . . . . . . NPFWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPST
Template Known Secondary structure  ............

TTB
TT
SS

B
STTGGGGTS

B




GGGG
GGGT

GGGS

S

BS

ST
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   286...290.........300.........310.........320.........330.........340.........350...
 
   164.....170.........180.........190.........200 .........210.........220.......
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Query Sequence  LGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRD. . . . . . . . . . . . . . . . IADNIATILRDQGVDIILNAHVERISH
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Template Sequence  DGQRYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVR
Template Known Secondary structure  TS


S
TTT


GGGSTT

TT



B
TT
TT
TT
S

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   354.....360.........370.........380.........390.........400.........410.........420.........430...
 
   228.230..... ....240.. .......250.........260... .
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Query Sequence  HENQVQVH. . . . . . . SEHAQLA. . . VDALLIASGRQPATASLHPEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A
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Template Sequence  NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMT
Template Known Secondary structure  TTS
TTSSGGG
STTBS
TSS

GGG
B


TT

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   434.....440.........450.........460.........470.........480.........490.........500.........510...
 
   265....270.........280.. .......290.... .....300.........310.....
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Query Sequence  GIAVNERGAIVVDKRLHT. TADNIWAMGDVT. . . . GGLQFTYISLDDYRIVRDELL
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Template Sequence  TIGSSPQSAV. VDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKIL
Template Known Secondary structure 
B
S
TTT
S.B
TT
BBTT
SS
SGGG
SS

SS
S
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   695....700.... .....710.........720.........730.........740.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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