Job Description P77212 Confidence 99.53% Date Thu Jan 5 12:26:22 GMT 2012 Rank 184 Aligned Residues 260 % Identity 19% Template c3rhaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putrescine oxidase; PDBTitle: the crystal structure of oxidoreductase from arthrobacter aurescens Resolution 2.05 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		M	N	K	.	.	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L
Query Conservation					.	.
Alig confidence					.	.																																													.	.																		.	.	.
Template Conservation																																																			.	.																		.	.	.
Template Sequence		M	Q	N	L	D	R	D	V	V	I	V	G	A	G	P	S	G	L	T	A	A	R	E	L	K	K	A	G	L	S	V	A	V	L	E	A	R	D	R	V	G	G	R	T	W	T	D	T	I	.	.	D	G	A	M	L	E	I	G	G	Q	W	V	S	P	D	Q	T	.	.	.	V	L	M	E	L	L	D	E	L
Template Known Secondary structure								S							S													T	T								S	S	S	S	S		T	T							.	.	T	T						S						T	T			.	.	.
Template Predicted Secondary structure																																																			.	.																		.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	T	T
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	K	M	Y	S	R	Y	R	D	G	E	S	V	Y	I	G	A	D	G	K	R	T	Q	Y	T	G	D	T	F	P	V	N	E	T	T	K	A	E	M	D	K	L	V	A	I	L	D	E	L	A	A	E	I	G	P	T	E	P	W	A	H	P	K	A	R	E	L	D	T	I	S	F	H	H	W	L	R	Q	N
Template Known Secondary structure		T										S							T	T								S	S	S		S																									S	S		G	G	G	S	T	T						S	S	B
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	V	Y	D	S	T	G	L	L	N	L	K	E	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	D	E	E	A	C	N	N	I	G	L	F	I	A	G	G	M	L	T	K	P	A	H	A	F	S	A	L	Q	A	V	L	M	A	A	S	A	G	S	F	S	H	L	T	D	E	D	F	I	L	D	K	R	V	I	G	G	M	Q	Q	V	S	L	L	Q	A	A	E	L	G	D	D	V	V	L	N	S	P	V
Template Known Secondary structure																						S		T	T	S	S	B											T	T												T					T	T		T	T											G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	S	H	H	E	N	Q	V	Q	V	H	S	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	I	K	W	D	E	N	G	V	S	V	V	S	E	R	A	T	V	N	A	R	F	V	I	M	A	V	P	P	N	L	Y	S	R	V	S	F	D	P	P	L	P
Template Known Secondary structure								T	T							S	S						S						S		G	G	G	G	G	G	S				S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions