Job Description P77212 Confidence 100.00% Date Thu Jan 5 12:26:22 GMT 2012 Rank 25 Aligned Residues 436 % Identity 25% Template c3l8kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoyl dehydrogenase from2 sulfolobus solfataricus Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.
Query Sequence		M	N	K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	.	.	.	.	.	.	.	.	.	Q	Q	H	T	D	F	V	R	A	I	Q	R	K
Query Conservation																																																												.	.	.	.	.	.	.	.	.
Alig confidence				.																																				.																				.	.	.	.	.	.	.	.	.
Template Conservation				.																																				.
Template Sequence		L	K	.	Y	D	V	V	V	I	G	A	G	G	A	G	Y	H	G	A	F	R	L	A	K	A	K	Y	N	V	L	M	A	D	P	K	G	E	L	.	G	G	N	C	L	Y	S	G	C	V	P	S	K	T	V	R	E	V	I	Q	T	A	W	R	L	T	N	I	A	I	P	L	D	F	S	T	V	Q	D	R	K
Template Known Secondary structure				.									S													T	T								T	T	S	S	S	.	S							S
Template Predicted Secondary structure				.																																				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	V	V	N	F	L	R	N	K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	T	P	G	V	Y	D	S	T	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	V	Q	E	L	R	F	K	Q	H	K	R	N	M	S	Q	Y	E	T	L	T	F	Y	K	G	Y	V	K	I	K	D	P	T	H	V	I	V	K	T	D	E	G	K	E	I	E	A	E	T	R	Y	M	I	I	A	S	G	A	E	T	A	K	L	R	L	P	G	V	E	Y	C	L	T	S	D	D	I	F	G
Template Known Secondary structure																	T	T		T	T						S							T	T							T	T																									T	T	G	G	G		B							S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		152	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																										.
Query SS confidence				.	.																																										.
Query Sequence		L	N	.	.	L	K	E	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	.	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V	E	R	I	S	H	H
Query Conservation				.	.																																										.
Alig confidence				.	.																																										.
Template Conservation
Template Sequence		Y	K	T	S	F	R	K	L	P	Q	D	M	V	I	I	G	A	G	Y	I	G	L	E	I	A	S	I	F	R	L	M	G	V	Q	T	H	I	I	E	M	L	D	R	A	L	I	T	L	E	D	Q	D	I	V	N	T	L	L	S	I	L	K	L	N	I	K	F	N	S	P	V	T	E	V	K	K	I	K	D	D
Template Known Secondary structure		T	T		S			S			S								S													T	T								S	S	S	S	S		T	T	S																				S											T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		229	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		E	N	Q	V	Q	V	H	S	E	H	A	.	.	.	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I	V	V	D	K	R	L	H	T	T	A	D	N	I	W	A	M	G	D	V	T	G	G	L	Q	F	T	Y	I	S	L	D
Query Conservation													.	.	.
Alig confidence													.	.	.																										.	.
Template Conservation																																									.	.
Template Sequence		E	Y	E	V	I	Y	S	T	K	D	G	S	K	K	S	I	F	T	N	S	V	V	L	A	A	G	R	R	P	V	I	P	E	G	A	R	E	I	G	.	.	L	S	I	S	K	T	G	I	V	V	D	E	T	M	K	T	N	I	P	N	V	F	A	T	G	D	A	N	G	L	A	P	Y	Y	H	A	A	V	R
Template Known Secondary structure										S	S	S								S														T	T	T	T	T	T	T	.	.			B		S	S	S	B				T	T		B		S	S	T	T					G	G	G	T		S	S		S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		D	Y	R	I	V	R	D	E	L	L	G	E	G	K	R	S	T	.	D	D	R	K	N	V	P	Y	S	V	F	M	T	P	P	L	S	R	V	G	M	T	E	E	Q	A	R	E	S	G	A	D	I	Q	V	V	T	L	P	V	A	A	I	P	R	A	R	V	M	N	D	T	R	G	V	L	K	A	I	V	D	N
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		M	S	I	A	A	A	N	N	I	M	A	N	G	M	P	V	D	Y	V	D	V	K	S	I	P	V	T	I	Y	T	I	P	S	L	S	Y	V	G	I	L	P	S	K	A	R	K	M	G	I	E	I	V	E	A	E	Y	N	M	E	E	D	V	S	A	Q	I	Y	G	Q	K	E	G	V	L	K	L	I	F	E	R
Template Known Secondary structure												T	T	T								G	G	G	S						S	S	S																T										G	G	G								T												T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	Q	R	M	L	G	A	S	L	L	C	V	D	S	H	E	M	I	N	I	V	K	M	V	M	D	A	G	L	P	Y	S	I	L	R	D	Q	I	F	T	H	P	S	M	S	E	S	L	N	D	L	F	S	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	M	R	L	I	G	A	W	M	I	G	V	H	S	Q	Y	L	I	N	E	L	G	L	A	V	A	Y	G	L	N	A	K	Q	L	A	S	F	A	E	Q	H	P	S	T	N	E	I	I	S	Y	T	A	R	K	V
Template Known Secondary structure		T	T		B									T	T															T		B							S				T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.