Job Description P77212 Confidence 99.96% Date Thu Jan 5 12:26:22 GMT 2012 Rank 77 Aligned Residues 298 % Identity 19% Template c3d8xB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of saccharomyces cerevisiae nadph dependent2 thioredoxin reductase 1 Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L	R	N
Query Conservation
Alig confidence				.																																						.	.	.	.	.	.	.	.
Template Conservation				.																																						.	.	.	.	.	.	.	.
Template Sequence		V	H	.	N	K	V	T	I	I	G	S	G	P	A	A	H	T	A	A	I	Y	L	A	R	A	E	I	K	P	I	L	Y	E	G	M	M	A	N	G	I	.	.	.	.	.	.	.	.	A	A	G	G	Q	L	T	T	T	T	E	I	E	N	F	P	G	F	P	D	G	L	T	G	S	E	L	M	D	R	M	R
Template Known Secondary structure				.									S													T	T									S	S	G	G	G		.	.	.	.	.	.	.	.		T	T		G	G	G	G		S					S	T	T		T	T
Template Predicted Secondary structure				.																																						.	.	.	.	.	.	.	.
Template SS confidence
		2	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	T	P	.	.	.	.	G	V	Y	D	S	T	G	L	L	N	L	K	E
Query Conservation																																																																	.	.	.	.
Alig confidence																																																																	.	.	.	.
Template Conservation
Template Sequence		E	Q	S	T	K	F	G	T	E	I	I	T	E	T	V	S	K	V	D	L	S	S	K	P	F	K	L	W	T	E	F	N	E	D	A	E	P	V	T	T	D	A	I	I	L	A	T	G	A	S	A	K	R	M	H	L	P	G	E	E	T	Y	W	Q	K	G	I	S	A	C	A	V	C	D	G	A	V	P	I	F
Template Known Secondary structure							T	T														S	S	S	S						T	T		T	T	S																						T	T					B	T	T	T			S						T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V	E	R	I	S	H	H	E	N	Q	V	Q	V	H	S
Query Conservation
Alig confidence																																												.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		R	N	K	P	L	A	V	I	G	G	G	D	S	A	C	E	E	A	Q	F	L	T	K	Y	G	S	K	V	F	M	L	V	R	K	D	H	L	R	A	S	T	I	.	.	.	.	.	M	Q	K	R	A	E	K	N	E	K	I	E	I	L	Y	N	T	V	A	L	E	A	K	G	D	G	K	L	L	N	A	L	R
Template Known Secondary structure		T	T	S							S	S											T	T	T	S	S							S	S	S	S			S				.	.	.	.	.									T	T						S									S	S	S	S
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
									237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																											.																					.
Query SS confidence		.	.	.	.	.	.	.																																											.																					.
Query Sequence		.	.	.	.	.	.	.	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I	V	V	D	K	.	R	L	H	T	T	A	D	N	I	W	A	M	G	D	V	T	G	G	L	Q	.	F	T	Y	I	S	L	D	D	Y
Query Conservation		.	.	.	.	.	.	.																																											.																					.
Alig confidence		.	.	.	.	.	.	.																								.	.	.																	.																					.
Template Conservation																																.	.	.
Template Sequence		I	K	N	T	K	K	N	E	E	T	D	L	P	V	S	G	L	F	Y	A	I	G	H	T	P	A	T	K	I	V	.	.	.	A	G	Q	V	D	T	D	E	A	G	Y	I	K	T	V	P	G	S	S	L	T	S	V	P	G	F	F	A	A	G	D	V	Q	D	S	K	Y	R	Q	A	I	T	S	A	G	S	G
Template Known Secondary structure					T	T	T	T								S						S							G	G	G	.	.	.	T	T	T	S		B		T	T	S		B				T	T	S				S	S	T	T					G	G	G	G		S	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		308	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	V	R	D	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	M	A	A	L	D	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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