Return to main results Retrieve Phyre Job Id

Job DescriptionP77212
Confidence99.61%DateThu Jan 5 12:26:22 GMT 2012
Rank172Aligned Residues201
% Identity14%Templatec2r4jA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap
Resolution1.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRN
Query Conservation 

 








 


 

  
   
  
 


     

                                        
Alig confidence 
















































...........



















Template Conservation 

  








 
   
  

  
  
 



 
   


  




...........
 
          
   
  
Template Sequence  METKDLIVIGGGINGAGIAADAAGRGLSVLXLEAQDLACATSSASSKLI. . . . . . . . . . . HGGLRYLEHYEFRLVSEALA
Template Known Secondary structure 



STTT


SSSTT
SGGGSS

...........


GGGGGGT
Template Predicted Secondary structure 




















...........










Template SS confidence 















































































   1........10.........20.........30.........40......... 50.........60.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  KNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGH
Query Conservation                                                                                  
Alig confidence 

























.......................................














Template Conservation      
                     .......................................               
Template Sequence  EREVLLKXAPHIAFPXRFRLPHRPHL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RPAWMIRIGLFMYDH
Template Known Secondary structure 
TTT

TTT.......................................S
Template Predicted Secondary structure 















.......................................

Template SS confidence 















































































   70.........80.........90..... ....100.........110
 
   161........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 



























.....
Query SS confidence 










































































. . . . .
Query Sequence  LGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVH. . . . .
Query Conservation                                              
       

 
     
  
        
 .....
Alig confidence 










































































.....
Template Conservation                            
      
 
 
  
  

   
   
  
     
  
               
Template Sequence  LGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQXVVRKGGEVLTRTRATSARRENGLWIVEAEDID
Template Known Secondary structure  SS

SSS




TTSSB
TT


TT

STTTT
Template Predicted Secondary structure 































Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.........180.........190
 
   236...240.........250.
Predicted Secondary structure  .






Query SS confidence  .















Query Sequence  . SEHAQLAVDALLIASG
Query Conservation  .     
  
 

 
 
Alig confidence  .















Template Conservation 
     
 
  





Template Sequence  TGKKYSWQARGLVNATG
Template Known Secondary structure  T



G
Template Predicted Secondary structure 






Template SS confidence 
















   191........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions