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Job DescriptionP77212
Confidence100.00%DateThu Jan 5 12:26:22 GMT 2012
Rank28Aligned Residues432
% Identity21%Templatec2hqmB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glutathione reductase; PDBTitle: crystal structure of glutathione reductase glr1 from the yeast2 saccharomyces cerevisiae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50.........60
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Query Sequence  NKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCI. . . . . . . . . . . . . . . . . . . . . NIGCIPTKTLVHDAQQ
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Template Sequence  KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL
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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   61........70.........80.........90.........100.........110.........120.........130.........140
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Query Sequence  HTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGIT
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Template Sequence  TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIP. .
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   102.......110.........120.........130.........140.........150.........160.........170.........
 
   141........150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  TTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNA
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Template Sequence  GFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLS
Template Known Secondary structure  TGGGSB


S

S
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SSSSS
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   221........230. ........240.........250.........260.........270.........280.........290.......
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Query Sequence  HVERISHHENQ. . . VQVHSEHAQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKRLHTTADNIWAMGDVTGGL
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Template Sequence  KIVKVEKNVTDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMG. SENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGKV
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TTS
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S
.GGGTT

B
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GGGTTSS
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   260.........270.........280.........290.........300. ........310.........320.........330........
 
   298.300.........310.........320.. .......330.........340.........350.... .....360.........370...
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Query Sequence  QFTYISLDDYRIVRDELLGEGKRST. . DDRKNVPYSVFMTPPLSRVGMTEEQARESGAD. . IQVVTLPVAAIPRARVMND
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Template Sequence  ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEK
Template Known Secondary structure 

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GGGTT




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GGG

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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   374.....380.........390.........400.........410.........420.........430......
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Query Sequence  TRGVLKAIVDNKTQRMLGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDL
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Template Sequence  SPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTM
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TTTTSTTTT
BTS


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   420.........430.........440.........450.........460.........470.........480..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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