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Job DescriptionP77212
Confidence99.71%DateThu Jan 5 12:26:22 GMT 2012
Rank150Aligned Residues264
% Identity20%Templatec2e5vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  AVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRN. . . . .
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Template Sequence  IYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSEA
Template Known Secondary structure 

STT


SSTT
SSGGG

S



STT

TT
S
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  KNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGH
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Template Sequence  KNVIETFESWGFEFEEDLRLEGGHTKR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT



SS
B

TT
SS
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   82.......90.........100........
 
   161........170.........180.........190.........200.........210.........220.........230.. ......
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Query Sequence  LGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQV. . QVHSEH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEKRG
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SSS
TT




TTTTT
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   109110.........120.........130.........140.........150.........160
 
   239240.........250.........260...
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Query Sequence  AQLAVDALLIASGRQPATASLHPEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGEVFLLTETLRGEGAQIINEN
Template Known Secondary structure 


S




GGGSSSBSS
TT
S
TT


TT

GGG



TTT
TT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   264.....270.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGIAVNERGAIV
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Template Sequence  GERFLFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLSKIEDFERKFPVVAKYLARHGHNYKVKIPIFPAAHFVDGGIR
Template Known Secondary structure 


GGGGT
TTGGGS
T


TT
TT
TT

TTS

S
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   276...280.........290.... .....300.........310.........320.........330.........340.........350
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Query Sequence  VDKRLHTTADNIWAMGDVT. . . . . GGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARE
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Template Sequence  VNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSSWEGISTDDGIVHSVRISGNKTLSLKEIRR
Template Known Secondary structure 

TT
B
SSBT
GGG
SSSTTS

TTGGGTTTS






TT








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   321........330.........340.........350.........360.........370.........380.........390.........400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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