Job Description P77212 Confidence 100.00% Date Thu Jan 5 12:26:22 GMT 2012 Rank 37 Aligned Residues 417 % Identity 18% Template c2cduB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadph oxidase; PDBTitle: the crystal structure of water-forming nad(p)h oxidase from2 lactobacillus sanfranciscensis Resolution 1.8 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		M	N	K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	.	.	G	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L
Query Conservation																											.	.
Alig confidence				.	.	.																					.	.																																																.	.	.	.	.	.
Template Conservation				.	.	.																																																																						.	.	.	.	.	.
Template Sequence		M	K	.	.	.	V	I	V	V	G	C	T	H	A	G	T	F	A	V	K	Q	T	I	A	D	H	P	D	A	D	V	T	A	Y	E	M	N	D	N	I	S	F	L	S	G	I	A	L	Y	L	G	K	E	I	K	N	N	D	P	R	G	L	F	Y	S	S	P	E	E	L	S	N	L	G	.	.	.	.	.	.
Template Known Secondary structure				.	.	.							S															T	T								S	S	S			S	B									T	T		S	G	G	G		G	G	G	G	B	S									T	T	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.																																																																						.	.	.	.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		R	N	K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	T	P	G	V	Y	D	.	.	.	.	.	S	T	G	L	L	N
Query Conservation																																																																							.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																														.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	N	V	Q	M	R	H	Q	V	T	N	V	D	P	E	T	K	T	I	K	V	K	D	L	I	T	N	E	E	K	T	E	A	Y	D	K	L	I	M	T	T	G	S	K	P	T	V	P	P	I	P	G	I	D	S	S	R	V	Y	L	C	K	N	Y	N	D	A	K	K	L	F	E
Template Known Secondary structure		.	.	.	.	.	.	.	.						S								G	G	G	T							T	T	T									S														S		T	T	T	T	S	T	T					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	K	E	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	.	F	L	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V	E	R	I	S	H	H	E	N	Q	V
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		E	A	P	K	A	K	T	I	T	I	I	G	S	G	Y	I	G	A	E	L	A	E	A	Y	S	N	Q	N	Y	N	V	N	L	I	D	G	H	E	R	V	L	Y	K	Y	F	D	K	E	F	T	D	I	L	A	K	D	Y	E	A	H	G	V	N	L	V	L	G	S	K	V	A	A	F	E	E	V	D	D	E	I
Template Known Secondary structure			G	G	G		S								S												T	T	T								S	S	S	S	T	T	T	T	T	S															T	T						S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		233	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.											.	.	.	.	300	.
Predicted Secondary structure						.																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	H	S	.	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I	V	V	D	K	R	L	H	T	T	A	D	N	I	W	A	M	G	D	V	T	G	.	.	.	.	.	.	.	.	.	.	G	L	Q	F	T	Y
Query Conservation						.																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence						.																													.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		I	T	K	T	L	D	G	K	E	I	K	S	D	I	A	I	L	C	I	G	F	R	P	N	T	E	L	L	K	G	K	V	A	.	.	.	M	L	D	N	G	A	I	I	T	D	E	Y	M	H	S	S	N	R	D	I	F	A	A	G	D	S	A	A	V	H	Y	N	P	T	N	S	N	A	Y	I	P	L	A	T
Template Known Secondary structure						T	T	S						S						S							G	G	G	T	T	T	S		.	.	.	B		T	T			B				T	T	S	B		S	S	T	T					G	G	G	B					G	G	G	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	D	D	Y	R	I	V	R	D	E	L	L	G	E	G	K	R	S	T	D	D	R	K	N	V	P	Y	S	V	F	M	T	P	P	L	S	R	V	G	M	T	E	E	Q	A	R	E	S	G	A	D	I	Q	V	V	T	L	P	V	A	A	I	P	R	A	R	V	M	N	D	T	R	G	V	L	K	A	I
Query Conservation
Alig confidence																	.																																																						.
Template Conservation																	.																																																						.
Template Sequence		N	A	V	R	Q	G	R	L	V	G	L	N	L	T	E	.	D	K	V	K	D	M	G	T	Q	S	S	S	G	L	K	L	Y	G	R	T	Y	V	S	T	G	I	N	T	A	L	A	K	A	N	N	L	K	V	S	E	V	I	I	A	D	N	Y	R	P	E	F	M	L	.	S	T	D	E	V	L	M	S	L	V
Template Known Secondary structure													T	S	S	S	.								B									T	T																T	T												S	S		T	T	S	S	.
Template Predicted Secondary structure																	.																																																						.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																												.
Query SS confidence																			.																												.
Query Sequence		V	D	N	K	T	Q	R	M	L	G	A	S	L	L	C	V	D	.	S	H	E	M	I	N	I	V	K	M	V	M	D	A	G	L	P	Y	S	I	L	R	D	Q	I	F	T	.	H	P	S	M	S	E	S	L	N	D	L	F	S	L
Query Conservation																			.																												.
Alig confidence																			.																												.
Template Conservation
Template Sequence		Y	D	P	K	T	R	V	I	L	G	G	A	L	S	S	M	H	D	V	S	Q	S	A	N	V	L	S	V	C	I	Q	N	K	N	T	I	D	D	L	A	M	V	D	M	L	F	Q	P	Q	F	D	R	P	F	N	Y	L	N	I	L
Template Known Secondary structure				T	T	T		B									S	S			T												T	T		B							S						T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.