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Job DescriptionP77212
Confidence99.63%DateThu Jan 5 12:26:22 GMT 2012
Rank168Aligned Residues243
% Identity12%Templatec1s3bB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:amine oxidase [flavin-containing] b; PDBTitle: crystal structure of maob in complex with n-methyl-n-2 propargyl-1(r)-aminoindan
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNK
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Template Sequence  NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQN. . . . . . . RILRLAKEL
Template Known Secondary structure 
B
S

BTT


SSSSSBTT

TTTSS


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   3......10.........20.........30.........40.........50.........60...... ...70.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  NFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGHL
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Template Sequence  GLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKL
Template Known Secondary structure  T




SSTT
SSS



STTS
TT
GGGSTTTSB
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   162.......170.........180........ .190.........200.........210.........220..
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Query Sequence  GILGGGYIGVEFASMFANFGSKVTILE. . . . . . . . . . . . . . . . . . . AASLFLPREDRDIADNIATILRDQGVDIILNAHV
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Template Sequence  CWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPV
Template Known Secondary structure 
SSSS
TTTSBTTT

STTSTTSTT
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   223......230...... ...240.........250.
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Query Sequence  ERISHHENQVQVHS. EHAQLAVDALLIASG
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Template Sequence  IYIDQTRENVLVETLNHEMYEAKYVISAIP
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SSSSTTS
S
S
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   236...240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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