Job Description P77212 Confidence 100.00% Date Thu Jan 5 12:26:22 GMT 2012 Rank 48 Aligned Residues 391 % Identity 18% Template c1q1wA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putidaredoxin reductase; PDBTitle: crystal structure of putidaredoxin reductase from2 pseudomonas putida Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	W	R	.	.	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L	R	N
Query Conservation																												.	.
Alig confidence																												.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	N	V	V	I	V	G	T	G	L	A	G	V	E	V	A	F	G	L	R	A	S	G	W	E	G	N	I	R	L	V	G	D	A	T	V	I	P	H	H	L	P	P	L	S	K	A	Y	L	A	G	K	A	T	A	E	S	L	Y	L	R	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S									S													T	T			S							S			S			B		S	G	G	G	G	T	T	T	T	T	T		S		S	G	G	G	B	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	.	.	.	.	.	.	.	.	T	P	G	V	Y	D	S	T	G	L	L
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																																										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	A	Y	A	A	Q	N	I	Q	L	L	G	G	T	Q	V	T	A	I	N	R	D	R	Q	Q	V	I	L	S	D	G	R	A	L	D	Y	D	R	L	V	L	A	T	G	G	R	P	R	P	L	P	V	A	S	G	A	V	G	K	A	N	N	F	R	Y	L	R	T	L	E	D	A	E	C	I	R
Template Known Secondary structure		.	.	.	.						T	T						S								T	T	T	T					T	T	S						S														G	G	G	T	T					S	T	T				S	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	L	K	E	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	.	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V	E	R	I	S	H	H	E	N	Q
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		R	Q	L	I	A	D	N	R	L	V	V	I	G	G	G	Y	I	G	L	E	V	A	A	T	A	I	K	A	N	M	H	V	T	L	L	D	T	A	A	R	V	L	E	R	V	T	A	P	P	V	S	A	F	Y	E	H	L	H	R	E	A	G	V	D	I	R	T	G	T	Q	V	C	G	F	E	M	S	T	D	Q
Template Known Secondary structure		T	T			T	T									S													T	T								S	S	S	S	T	T	T	T	T	S																T						S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		232	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	V	H	S	.	.	.	.	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I	V	V	D	K	R	L	H	T	T	A	D	N	I	W	A	M	G	D	V	T	G	G	L	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.	.	.																																																														.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																												.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		Q	K	V	T	A	V	L	C	E	D	G	T	R	L	P	A	D	L	V	I	A	G	I	G	L	I	P	N	C	E	L	A	S	A	A	G	.	.	.	.	L	Q	V	D	N	G	I	V	I	N	E	H	M	Q	T	S	D	P	L	I	M	A	V	G	D	C	A	R	F	H	S	Q	L	Y	D	R	W	V	R	I
Template Known Secondary structure										T	T	S						S																	T	T	T	.	.	.	.			B	S	S	S					T	T	S	B		S	S	T	T					G	G	G						T	T	T	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	T	Y	I	S	L	D	D	Y	R	I	V	R	D	E	L	L	G	E	G	K	R	S	T	D	D	R	K	N	V	P	Y	S	V	F	M	T	P	P	L	S	R	V	G	M	T	E	E	Q	A	R	E	S	G	A	D	I	Q	V	V	T	L	P	V	A	A	I	P	R	A	R	V	M	N	D	T	R	G	V
Query Conservation
Alig confidence																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	V	P	N	A	L	E	Q	A	R	K	I	A	A	I	L	C	G	K	V	P	R	D	E	.	.	A	A	P	W	F	W	S	D	Q	Y	E	I	G	L	K	M	V	G	L	S	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	I	I	V	R	G	S	L	A	Q	P	D	F
Template Known Secondary structure			S																T	T							.	.										T	T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T	S	S
Template Predicted Secondary structure																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.																	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	I	V	D	N	K	T	Q	R	M	L	G	A	S	L	L	C	V	D	S	H	E	M	I	N	I	V	K	M	V	M	D	A	G	L	P	Y	S	I	L	R	D	Q	I	F	T	H	P	S	M	S	E	S	L	N	D	L	F	S	L	V
Query Conservation
Alig confidence							.	.																																						.	.	.
Template Conservation							.	.																																						.	.	.
Template Sequence		S	V	F	Y	L	.	.	Q	G	D	R	V	L	A	V	D	T	V	N	R	P	V	E	F	N	Q	S	K	Q	I	I	T	D	R	L	P	V	E	P	N	L	L	G	D	.	.	.	E	S	V	P	L	K	E	I	I	A	A	A	K	A	E	L
Template Known Secondary structure							.	.		T	T									S														T	T									S		.	.	.	T	T	S
Template Predicted Secondary structure							.	.																																						.	.	.
Template SS confidence
		362	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.