Job Description P77212 Confidence 100.00% Date Thu Jan 5 12:26:22 GMT 2012 Rank 39 Aligned Residues 412 % Identity 18% Template c1nhqA_ PDB info PDB header:oxidoreductase (h2o2(a)) Chain: A: PDB Molecule:nadh peroxidase; PDBTitle: crystallographic analyses of nadh peroxidase cys42ala and cys42ser2 mutants: active site structure, mechanistic implications, and an3 unusual environment of arg303 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		M	N	K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	.	.	G	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L
Query Conservation																											.	.
Alig confidence				.	.	.																					.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	.	.	.	V	I	V	L	G	S	S	H	G	G	Y	E	A	V	E	E	L	L	N	L	H	P	D	A	E	I	Q	W	Y	E	K	G	D	F	I	S	F	L	S	S	G	M	Q	L	Y	L	E	G	K	V	K	D	V	N	S	V	R	Y	M	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.						S	S															T	T	S							S	S	S	S	S	S	B		G	G	G						T	T	S	S			G	G	G	S	B	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		R	N	K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	.	.	.	.	.	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	T	P	G	V	Y	D	S	T	G	L	L	N
Query Conservation																																								.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	E	K	M	E	S	R	G	V	N	V	F	S	N	T	E	I	T	A	I	Q	P	K	E	H	Q	V	T	V	K	D	L	V	S	G	E	E	R	V	E	N	Y	D	K	L	I	I	S	P	G	A	V	P	F	E	L	D	I	P	G	K	D	L	D	N	I	Y	L	M	R	G	R	Q	W	A
Template Known Secondary structure		.	.	.	.	.	.						T	T						T								T	T	T	T							T	T	T									S															S	T	T	T	T		B	T					S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		154	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																																					.
Query SS confidence					.	.	.	.	.	.	.																																					.
Query Sequence		L	K	E	.	.	.	.	.	.	.	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	.	F	L	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V	E	R	I
Query Conservation					.	.	.	.	.	.	.																																					.
Alig confidence					.	.	.	.	.	.	.																																					.
Template Conservation
Template Sequence		I	K	L	K	Q	K	T	V	D	P	E	V	N	N	V	V	V	I	G	S	G	Y	I	G	I	E	A	A	E	A	F	A	K	A	G	K	K	V	T	V	I	D	I	L	D	R	P	L	G	V	Y	L	D	K	E	F	T	D	V	L	T	E	E	M	E	A	N	N	I	T	I	A	T	G	E	T	V	E	R	Y
Template Known Secondary structure									T		T	T										S													T	T								S	S	S	S	T	T	T	T	T																T	T						S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		S	H	H	E	N	Q	V	Q	V	H	S	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I	V	V	D	K	R	L	H	T	T	A	D	N	I	W	A	M	G	D	V	T	G	G	L	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.
Template Sequence		E	G	D	G	R	V	Q	K	V	V	T	D	K	N	A	Y	D	A	D	L	V	V	V	A	V	G	V	R	P	N	T	A	W	L	.	.	.	K	G	T	L	E	L	H	P	N	G	L	I	K	T	D	E	Y	M	R	T	S	E	P	D	V	F	A	V	G	D	A	T	L	I	K	Y	N	P	A	D	T	E	V
Template Known Secondary structure				S	S	B							S	S						S						S					S		G	G	G	.	.	.	T	T	T	S		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B					G	G	G	T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
				298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	F	T	Y	I	S	L	D	D	Y	R	I	V	R	D	E	L	L	G	E	G	K	R	S	T	D	D	R	K	N	V	P	Y	S	V	F	M	T	P	P	L	S	R	V	G	M	T	E	E	Q	A	R	E	S	G	A	D	I	Q	V	V	T	L	P	V	A	A	I	P	R	A	R	V	M	N	D	T	R
Query Conservation		.	.
Alig confidence		.	.																										.																																															.
Template Conservation																													.																																															.
Template Sequence		N	I	A	L	A	T	N	A	R	K	Q	G	R	F	A	V	K	N	L	E	E	P	V	K	P	F	P	.	G	V	Q	G	S	S	G	L	A	V	F	D	Y	K	F	A	S	T	G	I	N	E	V	M	A	Q	K	L	G	K	E	T	K	A	V	T	V	V	E	D	Y	L	M	D	F	N	.	P	D	K	Q	K
Template Known Secondary structure																			T	S	S	S							.		B									T	T																	T												S	S		T	T		.	T	T
Template Predicted Secondary structure																													.																																															.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.				.	.	.	.	.	.	.	440
Predicted Secondary structure																								.																													.								.	.	.
Query SS confidence																								.																													.								.	.	.
Query Sequence		G	V	L	K	A	I	V	D	N	K	T	Q	R	M	L	G	A	S	L	L	C	V	.	D	S	H	E	M	I	N	I	V	K	M	V	M	D	A	G	L	P	Y	S	I	L	R	D	Q	I	F	T	.	H	P	S	M	S	E	S	.	.	.	L	N	D	L	F	S	L	V
Query Conservation																								.																													.								.	.	.
Alig confidence																								.																													.								.	.	.
Template Conservation
Template Sequence		A	W	F	K	L	V	Y	D	P	E	T	T	Q	I	L	G	A	Q	L	M	S	K	A	D	L	T	A	N	I	N	A	I	S	L	A	I	Q	A	K	M	T	I	E	D	L	A	Y	A	D	F	F	F	Q	P	A	F	D	K	P	W	N	I	I	N	T	A	A	L	E	A
Template Known Secondary structure										T	T	T		B									S	S			T	T											T	T		B						T							T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.