Return to main results Retrieve Phyre Job Id

Job DescriptionP77212
Confidence99.95%DateThu Jan 5 12:26:22 GMT 2012
Rank92Aligned Residues313
% Identity14%Templatec1lqtB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:fpra; PDBTitle: a covalent modification of nadp+ revealed by the atomic resolution2 structure of fpra, a mycobacterium tuberculosis oxidoreductase
Resolution1.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.........70....
Predicted Secondary structure 







.......



























Query SS confidence 























. . . . . . .
















































Query Sequence  NKYQAVIIGFGKAGKTLAVTLAKA. . . . . . . GWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEV
Query Conservation 
 








 


 

  
   .......
  
 


     

                                  
Alig confidence 























.......














..















................
Template Conservation 

  
 








 

  
          
  
 
 
     

..    
  
        ................
Template Sequence  RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG. . LVRSGVAPDHPKIKSI. . . . . . . . . . . . . . . .
Template Known Secondary structure 



SSTT

SSSS
ST..TS
TT
TTGGGG................
Template Predicted Secondary structure 




















..







................
Template SS confidence 















































































   2.......10.........20.........30.........40....... ..50.........60...
 
   75....80.........90.........100.........110.........120......... 130.........140.........150...
Predicted Secondary structure 



















.













Query SS confidence 






















































.























Query Sequence  VNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGA. QTVVPPIPGITTTPGVYDSTGLLN
Query Conservation                                                         .                        
Alig confidence  .....





























.......












.























Template Conservation  .....       
    
       
         .......      

 
 
      
 
                 
Template Sequence  . . . . . SKQFEKTAEDPRFRFFGNVVVGEHVQPGEL. . . . . . . SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGW
Template Known Secondary structure  .....TSTTS

BTTTB
.......SS









TTTTSTT
Template Predicted Secondary structure  .....



.......























Template SS confidence 















































































   64.....70.........80.........90... ......100.........110.........120.........130.
 
   154.. ...160.........170.........180. ........190.........200....
Predicted Secondary structure  ...........








..................













Query SS confidence 


. . . . . . . . . . .
























. . . . . . . . . . . . . . . . . .






















Query Sequence  LKE. . . . . . . . . . . LPGHLGILGGGYIGVEFASMFANFG. . . . . . . . . . . . . . . . . . SKVTILEAASLFLPREDRDIADN
Query Conservation     ...........                         ..................                       
Alig confidence 


...........
























..................






















Template Conservation                    
 


 
 

 
 
  
                           
 
  
           
Template Sequence  YNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLE
Template Known Secondary structure  TT
GGGTT





SS
SSS
TTS


TT




SS
GGG



Template Predicted Secondary structure 






































Template SS confidence 















































































   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   205....210.. .......220.........230.....
Predicted Secondary structure 
..............................................






...
Query SS confidence 







. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .






















. . .
Query Sequence  IATILRDQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVDIILNAHVERISHHENQVQVH. . .
Query Conservation 
       ..............................................

 
     
  
        
 ...
Alig confidence 







..............................................






















...
Template Conservation                                                                    
     
  
    
Template Sequence  LRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGR
Template Known Secondary structure  GGGG
TT

GGGGTT


TS


TTS
S
SSS

Template Predicted Secondary structure 






























Template SS confidence 















































































   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   236...240.........250.........260.........270.........280. ........290........
Predicted Secondary structure  ................


























.










Query SS confidence  . . . . . . . . . . . . . . . .













































.
















Query Sequence  . . . . . . . . . . . . . . . . SEHAQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKRLH. TTADNIWAMGDVTGGLQ
Query Conservation  ................     
  
 

 
 
  
                 
 
 

    .
    


 

      
Alig confidence  ................



















......



















.
















Template Conservation          
       
    
  
 

 


    ......    
      
 
          
 


 

   

 
Template Sequence  NELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGV. . . . . . PTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT
Template Known Secondary structure 
SSSS
S
S


......

TTS

BTTTTB

TTTT
SS
T
S
Template Predicted Secondary structure 















......


























Template SS confidence 















































































   292.......300.........310.........320....... ..330.........340.........350.........360.....
 
   299300.........310.........320.........330.........340.........350.......
Predicted Secondary structure  .
























Query SS confidence  .


























































Query Sequence  . FTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQV
Query Conservation  .    
   
  

  
                        
 

     
         
Alig confidence  .

















.......

































Template Conservation 
 
      
   
  
  .......                                
 
Template Sequence  GVIGTNKKDAQDTVDTLIK. . . . . . . NLGNAKEGAECKSFPDHADQVADWLAARQPKLVT
Template Known Secondary structure  S
TT.......TT
S





TT
Template Predicted Secondary structure 

.......


















Template SS confidence 



























































   366...370.........380.... .....390.........400.........410........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions