Job Description P77212 Confidence 99.36% Date Thu Jan 5 12:26:22 GMT 2012 Rank 222 Aligned Residues 246 % Identity 12% Template c1h83A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:polyamine oxidase; PDBTitle: structure of polyamine oxidase in complex with2 1,8-diaminooctane Resolution 1.9 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	.	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L	R	N	K	N	F	H
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		V	I	V	V	G	A	G	M	S	G	I	S	A	A	K	R	L	S	E	A	G	I	T	D	L	L	I	L	E	A	T	D	H	I	G	G	R	M	H	K	T	N	F	A	G	I	N	V	E	L	G	A	N	W	V	E	G	V	N	G	G	K	M	N	P	I	W	P	I	V	N	S	T	L	K	L	R	N	F	R
Template Known Secondary structure								B													T	T									S	S	S	S	S	B	T	T	S						T	T					S	S								S	S	S	S			T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.														.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	T	T	T	P	G	V	Y	D	S	T	G	L
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	F	D	Y	L	A	Q	N	V	Y	K	E	D	G	G	V	Y	D	E	D	Y	V	Q	K	R	I	E	L	A	D	S	V	E	E	M	G	E	K	L	S	A	T	L	H	A	S	G	R	D	D	M	S	I	L	A	M	Q	R	L	N	E	H	Q	P	N	G	P	A	T	P	V	D	M	V	V	D	Y	Y	K
Template Known Secondary structure					T	T	G	G	G					S	S	S	S	B																										T	S		T	T	S	T	T			B										T	S	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	K	E	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G	V	D	I	I	L	N	A	H	V	E	R	I	S	H	H	E	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	Y	E	F	A	E	P	P	R	V	T	S	L	Q	N	T	V	P	L	A	T	F	S	D	F	G	D	D	V	Y	F	V	A	D	Q	R	G	Y	E	A	V	V	Y	Y	L	A	G	Q	Y	L	K	T	D	D	K	S	G	K	I	V	D	P	R	L	Q	L	N	K	V	V	R	E	I	K	Y	S	P	G	G
Template Known Secondary structure		T					S	S		G	G	G	B	B	S	T	T	T	S	S									S								T	T		T	T									T	T	S		B		T	T	T			B			T	T			S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		232	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		V	Q	.	V	H	S	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		V	T	V	K	T	E	D	N	S	V	Y	S	A	D	Y	V	M	V	S	A	S
Template Known Secondary structure							T	T	S						S						S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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