Job Description P77212 Confidence 99.97% Date Thu Jan 5 12:26:22 GMT 2012 Rank 61 Aligned Residues 311 % Identity 14% Template c1fcdB_ PDB info PDB header:electron transport(flavocytochrome) Chain: B: PDB Molecule:flavocytochrome c sulfide dehydrogenase (flavin- PDBTitle: the structure of flavocytochrome c sulfide dehydrogenase2 from a purple phototrophic bacterium chromatium vinosum at3 2.5 angstroms resolution Resolution 2.53 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		N	K	Y	Q	A	V	I	I	G	F	G	K	A	G	K	T	L	A	V	T	L	A	K	A	G	.	.	W	R	V	A	L	I	E	Q	S	N	A	M	Y	G	G	T	C	I	N	I	G	C	I	P	T	K	T	L	V	H	D	A	Q	Q	H	T	D	F	V	R	A	I	Q	R	K	N	E	V	V	N	F	L	R
Query Conservation																											.	.
Alig confidence				.	.																						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	.	.	V	V	V	V	G	G	G	T	G	G	A	T	A	A	K	Y	I	K	L	A	D	P	S	I	E	V	T	L	I	E	P	N	T	D	Y	Y	T	C	Y	L	S	N	E	V	I	G	G	D	R	K	L	E	S	I	K	H	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.							S	T	T										T	T		T	T	S							S		S	S				S	T	T	T						T	S	S		G	G	G	G				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		N	K	N	F	H	N	L	A	D	M	P	N	I	D	V	I	D	G	Q	A	E	F	I	N	N	H	S	L	R	V	H	R	P	E	G	N	L	E	I	H	G	E	K	I	F	I	N	T	G	A	Q	T	V	V	P	P	I	P	G	I	T	T	T	P	G	.	.	.	.	.	.	V	Y	D	S	T	G	L	L	N
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence		.	.	.	.	.																														.																															.	.	.	.	.	.
Template Conservation		.	.	.	.	.																														.
Template Sequence		.	.	.	.	.	D	G	L	R	A	H	G	I	Q	V	V	H	D	S	A	T	G	I	D	P	D	K	K	L	V	K	T	A	G	.	G	A	E	F	G	Y	D	R	C	V	V	A	P	G	I	E	L	I	Y	D	K	I	E	G	Y	S	E	E	A	A	A	K	L	P	H	A	W	K	A	G	E	Q	T	A	I
Template Known Secondary structure		.	.	.	.	.						T	T						S								T	T	T						T	.	S						S													T	T	S	T	T			T	T	G	G	G	T	S					S
Template Predicted Secondary structure		.	.	.	.	.																														.
Template SS confidence
							63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		L	K	E	L	P	G	H	L	G	I	L	G	G	G	Y	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	S	M	F	A	N	F	G	S	K	V	T	I	L	E	A	A	S	L	F	L	.	.	.	.	P	R	E	D	R	D	I	A	D	N	I	A	T	I	L	R	D	Q	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		L	R	K	Q	L	E	D	M	A	D	G	G	T	V	V	I	A	P	P	A	A	P	F	R	C	P	P	G	P	Y	E	R	A	S	Q	V	A	Y	Y	L	K	A	H	K	P	M	S	K	V	I	I	L	D	S	S	Q	T	F	S	K	Q	S	Q	F	S	K	G	W	E	R	L	Y	G	F	G	T	E	N	A	M
Template Known Secondary structure								S	S		T	T										S	S		B		T	T																		T	T								S		S	S		T	T														T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.		.	.	.	.	.	.	.	.	290
Predicted Secondary structure																				.																																																	.			.
Query SS confidence																				.																																																	.			.
Query Sequence		V	D	I	I	L	N	A	H	V	E	R	I	S	H	H	E	N	Q	.	V	Q	V	H	S	E	H	A	Q	L	A	V	D	A	L	L	I	A	S	G	R	Q	P	A	T	A	S	L	H	P	E	N	A	G	I	A	V	N	E	R	G	A	I	V	V	D	K	R	.	L	H	.	T	T	A	D	N	I	W	A	M
Query Conservation																				.																																																	.			.
Alig confidence																				.																									.									.	.	.													.			.
Template Conservation																																													.									.	.	.
Template Sequence		I	E	W	H	P	G	P	D	S	A	V	V	K	V	D	G	G	E	M	M	V	E	T	A	F	G	D	E	F	K	A	D	V	I	N	L	I	P	P	Q	R	A	G	.	K	I	A	Q	I	A	G	L	.	.	.	T	N	D	A	G	W	C	P	V	D	I	K	T	F	E	S	S	I	H	K	G	I	H	V	I
Template Known Secondary structure							T	T	T	T				S				T	T	T					T	T							S												.							T		.	.	.		B	T	T	T	B	B		B		S	S	S		B	B	S	S	S	T	T
Template Predicted Secondary structure																																													.									.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		291	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure								.	.	.																				.	.	.	.
Query SS confidence								.	.	.																				.	.	.	.
Query Sequence		G	D	V	T	G	G	.	.	.	L	Q	F	T	Y	I	S	L	D	D	Y	R	I	V	R	D	E	L	L	.	.	.	.	G	E	G	K	R	S	T	D	D	R	K	N	V	P	Y	S	V	F	M	T	P	P	L	S	R	V	G
Query Conservation								.	.	.																				.	.	.	.
Alig confidence								.	.	.																				.	.	.	.
Template Conservation
Template Sequence		G	D	A	S	I	A	N	P	M	P	K	S	G	Y	S	A	N	S	Q	G	K	V	A	A	A	A	V	V	V	L	L	K	G	E	E	P	G	T	P	S	Y	L	N	T	C	Y	S	I	L	A	P	A	Y	G	I	S	V	A	A
Template Known Secondary structure		G	G	G	B			S	S	S		B	S																				T	T								B			B							T	T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions