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Job DescriptionP77212
Confidence99.52%DateThu Jan 5 12:26:22 GMT 2012
Rank187Aligned Residues234
% Identity16%Templatec1f8sA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-amino acid oxidase; PDBTitle: crystal structure of l-amino acid oxidase from calloselasma2 rhodostoma, complexed with three molecules of o-aminobenzoate.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNK
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Template Sequence  NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEK. . . . . . . . . . . . . . . HR
Template Known Secondary structure  S



BTT

SSSSSBTT

TTTTSS


TT...............
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   32.......40.........50.........60.........70.........80.........90.... ..
 
   82.......90.........100.........110.........120.........130.........
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Query Sequence  NFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGI. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYI
Template Known Secondary structure  TT



S

TTSTT
GGGG




TTTTT

TS
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  . . TTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDII
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Template Sequence  LNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKVH
Template Known Secondary structure  GGGSBTT


TT
GGGTTSBTT


TT
TTTGGG
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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   218.220.........230...... ...240.........250
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Query Sequence  LNAHVERISHHENQVQVHS. . . . . EHAQLAVDALLIAS
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Template Sequence  FNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCT
Template Known Secondary structure  SS

SS

SSS


S
S
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   257..260.........270.........280.........290....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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