Job Description P33666 Confidence 67.77% Date Wed Jan 25 15:20:50 GMT 2012 Rank 27 Aligned Residues 150 % Identity 9% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		1735	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	V	V	A	K	G	D	P	R	A	E	L	G	N	N	T	E	Y	D	M	L	A	L	R	K	T	I	D	L	S	E	S	Q	T	M	S	L	E	Y	G	I	A	R	L	D	G	D	G	A	Q	K	A	G	D	N	G	V	T	G	G	Y	S	Q	F	F	G	L	K	H	Q	M	S	F	D	N	G	M	N	W
Query Conservation
Alig confidence																																		.	.	.												.	.	.	.
Template Conservation																																		.	.	.												.	.	.	.
Template Sequence		L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	.	.	.	G	V	A	K	L	S	G	L	L	Q	Q	.	.	.	.	T	K	F	K	R	D	I	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V
Template Known Secondary structure																T	T																	.	.	.	S	S										.	.	.	.						T	T	S																	T	T	T
Template Predicted Secondary structure																																		.	.	.												.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		1815	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	L	R	Y	D	V	H	N	L	D	S	S	R	S	I	A	F	G	N	T	N	K	T	A	D	T	D	V	K	Q	Q	Y	L	E	F	R	S	E	G	A	K	T	F	E	P	S	E	G	L	K	V	T	P	Y	A	G	V	K	L	R	H	T	L	E	G	G	Y	Q	E	R	N	A	G	D	F	N	L	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.										.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.										.	.
Template Sequence		K	L	Q	Y	A	L	Y	D	Q	K	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	K	A	H	Q	I	T	L	.	.	.	.	.	.	G	Y	V	H	N	L	S	K	R	.	.	T	A	L	Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G
Template Known Secondary structure											G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									.	.	.	.	.	.						S	S	S	S	.	.														T	T							B	T	T	T	B		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.										.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.															.	.	270	.	.	.	.	.	.							.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		1895	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	S	G	S	E	T	A	V	D	S	I	V	G	L	K	L	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions