Job Description P33666 Confidence 99.94% Date Wed Jan 25 15:20:50 GMT 2012 Rank 3 Aligned Residues 277 % Identity 13% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		1701	.	.	.	.	.	.	.	.	1710	.		.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		S	G	S	Q	A	T	T	V	F	R	E	.	A	R	V	L	S	N	R	F	S	M	L	A	D	A	A	P	K	V	G	N	G	L	A	F	N	V	V	A	K	G	D	P	R	A	E	L	G	N	N	T	E	Y	D	M	L	A	L	R	K	T	I	D	L	S	E	S	Q	T	M	S	L	E	Y	G	I	A	R	L
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		A	A	T	V	Y	A	D	S	T	A	A	H	A	D	M	Q	G	R	R	L	K	A	V	S	D	G	L	D	H	N	G	T	G	L	R	V	I	A	Q	T	Q	Q	D	G	G	T	W	E	Q	G	G	V	E	G	K	M	R	G	S	T	Q	T	V	G	I	A	A	K	T	G	E	N	T	T	A	A	A	T	L	G
Template Known Secondary structure																											T	T	T	S			S	S																	S	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
		1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	D	G	A	Q	K	A	G	D	N	G	V	T	G	G	Y	S	Q	F	F	G	L	K	H	Q	M	S	F	D	N	G	M	N	W	N	N	A	L	R	Y	D	V	H	N	L	D	S	S	R	S	I	A	F	G	N	T	N	K	T	A	D	T	D	V	K	Q	Q	Y	L	E	F	R	S	E	G	A	K	T	F
Query Conservation
Alig confidence										.																																																.	.	.
Template Conservation										.																																																.	.	.
Template Sequence		M	G	R	S	T	W	S	E	.	N	S	A	N	A	K	T	D	S	I	S	L	F	A	G	I	R	H	D	A	G	D	I	G	Y	L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	.	.	.	H	A	E	G	S	V	N	G	T	L	M	Q	L	G	A	L	G	G	V	N	V
Template Known Secondary structure										.	T	T																			T	T	T																					S	S	S		.	.	.
Template Predicted Secondary structure										.																																																.	.	.
Template SS confidence
		866	.	.	.	870	.	.	.		.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920				.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.
		1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	S	E	G	L	K	V	T	P	Y	A	G	V	K	L	R	H	T	L	E	G	G	Y	Q	E	R	N	A	G	D	F	N	L	N	M	N	S	G	S	E	T	A	V	D	S	I	V	G	L	K	L	D	Y	A	G	K	D	G	W	S	A	S	A	T	L	E	G	G	P	N	L	S	Y	A	K	S	Q	R	T
Query Conservation
Alig confidence		.	.	.																										.																																																		.	.
Template Conservation		.	.	.																										.																																																		.	.
Template Sequence		.	.	.	P	T	G	D	L	T	V	E	G	G	L	R	Y	D	L	L	K	Q	D	A	F	A	E	K	G	.	S	A	L	G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	N	G	R	D	Y	T	.	.
Template Known Secondary structure		.	.	.																									S	.		T	T																									S	S	S													S	S						.	.
Template Predicted Secondary structure		.	.	.																										.																																																		.	.
Template SS confidence
					942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.		.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.
		1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.		.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		A	S	L	A	G	A	G	S	Q	H	F	N	V	D	D	G	Q	K	G	G	G	I	N	S	L	T	S	V	G	V	K	Y	S	.	S	K	E	S	S	L	N	L	D	A	Y	N	W	K	E	D	G	I	S	D	K	G	V	M	L	N	F	K	K	T	F
Query Conservation																																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	P	H	T	R	L	V	A	G	L	G	A	D	V	E	F	G	N	G	W	N	G	L	A	R	Y	S	Y	A	G	S	K	Q	Y	G	N	H	S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		1019	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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