Job Description P33666 Confidence 96.45% Date Wed Jan 25 15:20:50 GMT 2012 Rank 13 Aligned Residues 149 % Identity 16% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		1771	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	Y	G	I	A	R	L	D	G	D	G	A	Q	K	A	G	D	N	G	V	T	G	G	Y	S	Q	F	F	G	L	K	H	Q	M	S	F	D	N	G	M	N	W	N	N	A	L	R	Y	D	V	H	N	L	D	S	S	R	S	I	A	F	G	N	T	N	K	T	A	D	T	D	V	K	Q	Q	Y	L	E
Query Conservation
Alig confidence																			.	.	.	.	.																			.	.	.																																	.	.	.	.	.
Template Conservation																			.	.	.	.	.																			.	.	.																																	.	.	.	.	.
Template Sequence		G	F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	.	.	.	.	.	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	.	.	.	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	.	.	.	.	.
Template Known Secondary structure																	S	S	.	.	.	.	.																	T	T	.	.	.													S	S			S	S															.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.																			.	.	.																																	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		1851	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	S	E	G	A	K	T	F	E	P	S	E	G	L	K	V	T	P	Y	A	G	V	K	L	R	H	T	L	E	G	G	Y	Q	E	R	N	A	G	D	F	N	L	N	M	N	S	G	S	E	T	A	V	D	S	I	V	G	L	K	L	D	Y	A	G	K	D	G	W	S	A	S	A	T	L	E	G	G	P	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																																.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	F	D	T	Q	S	P	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	.	.	.	.	.	.	.	.	S	F	S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.				S	S	S																			T	T			.	.	.	.	.	.	.	.																					T	T										.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																																.	.	.
Template SS confidence
												72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		1931	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Y	A	K	S	Q	R	T	A	S	L	A	G	A	G	S	Q	H	F	N	V	D	D	G	Q	K	G	G	G	I	N	S	L	T	S	V	G	V	K	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	E	L	.	S	A	G	V	R	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T										.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																			131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions