Return to main results Retrieve Phyre Job Id

Job DescriptionP33666
Confidence48.84%DateWed Jan 25 15:20:50 GMT 2012
Rank38Aligned Residues196
% Identity10%Templated1i78a_
SCOP infoTransmembrane beta-barrels OMPT-like Outer membrane protease OMPT
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1751..... ...1760.........1770........ .1780.........1790.........1800.........1810.........1820.....
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Query Sequence  TEYDML. ALRKTIDLSESQTMSLEYGIAR. . . . LDGDGAQKAGDNGVTGGYSQFFGLKHQMSFDNGMNWNNALRYDVHNL
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Template Sequence  LDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNPGTW. . . . . . . . . . . . . . . . . . . . . . . . . .
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   42.......50.........60.........70.........80.........90.....
 
   1826...1830.........1840.........1850.........1860.........1870.........1880.... .....1890..
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Query Sequence  DSSRSIAFGNTNKTADTDVKQQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQ. . . . . . . . . . . . . ERNAGDFN
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Template Sequence  . . . . . . . . TDEARHPDTQLN. YANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEGFRDDIGSFPNG
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   96...100....... ..110.........120.........130.........140.........150.........160......
 
   1893......1900.........1910.........1920.........1930.........1940.........1950.........1960.........1970..
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Query Sequence  LNMNSGSETAVDSIVGLKLDYAGKDGWSASATLEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLTSVGVKYS
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Template Sequence  ERAIGYKQRFKMPYIGLTGSYRYED. FELGGTFKYSGWVE. SSDNDEHYDP. KGRITYR. SKVKDQNYYSVAVNAGYYVT
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   167..170.........180.........190. ........200..... ....210..... ....220.. .......230.........240..
 
   1973......1980......
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Query Sequence  SKESSLNLDAYNWK
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Template Sequence  . PNAKVYVEGAWNR
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   243......250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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