Job Description P33666 Confidence 24.13% Date Wed Jan 25 15:20:50 GMT 2012 Rank 101 Aligned Residues 60 % Identity 20% Template c4a1cA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:rpl8; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. Resolution 3.52 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.												.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		K	L	S	P	E	E	L	K	R	L	P	S	E	C	.	.	.	.	.	.	S	P	L	V	E	Q	N	L	M	P	W	L	S	T	G	A	A	.	.	.	.	.	.	.	.	.	.	.	A	L	I	T	A	L	A	V	.	.	V	E	L	N	D	D	D	D	H	H	H	R	N	N	S	P	L	P	P	T	P
Query Conservation																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		R	L	P	S	G	A	R	K	T	I	P	G	S	C	R	A	T	V	G	I	V	A	G	G	G	R	T	D	K	P	I	L	K	A	G	N	Q	F	H	K	Y	A	R	K	R	K	S	W	P	R	V	R	G	V	A	M	N	P	V	D	H	P	H	G	G	G	N	H	Q	H	I	G	H	P	A	T	V	S	K
Template Known Secondary structure				T	T	S							T	T						S		B	S	S	T	T	G	G	G	S														T	S	S				S				T	T	T	S		T	T	T		S	S			S	S	S					S		S				T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions