Return to main results Retrieve Phyre Job Id

Job DescriptionP33666
Confidence28.47%DateWed Jan 25 15:20:50 GMT 2012
Rank74Aligned Residues60
% Identity18%Templatec3d5bD_
PDB info PDB header:ribosomeChain: D: PDB Molecule:50s ribosomal protein l2; PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 50s subunit of one 70s ribosome. the entire crystal3 structure contains two 70s ribosomes as described in remark 400.
Resolution3.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60 .........70......... 80..... ....90.........100......
Predicted Secondary structure 



......






........

















Query SS confidence 













. . . . . .


















. . . . . .





. .




















Query Sequence  KLSPEELKRLPSEC. . . . . . SPLVEQNLMPWLSTGAAAL. . . . . . ITALAV. . VELNDDDDHHHRNNSPLPPTP
Query Conservation                ......                   ......      ..                     
Alig confidence 













......


















......





..




















Template Conservation 





 
 
   
 



 


       




  



 

 















 

   

   

Template Sequence  RLPSGELRKVHGECYATVGAVGNADHKNIVLGKAGRSRWLGRRPHVRGAAMNPVDHPHGGGEGRAPRGRPPASP
Template Known Secondary structure 
TTS
TT
SS

GGGG



STTTB




STTS
GGG
SS


SSS


SSS
B
T
Template Predicted Secondary structure 


















































Template SS confidence 









































































   176...180.........190.........200.........210.........220.........230.........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions