Job Description P33666 Confidence 34.02% Date Wed Jan 25 15:20:50 GMT 2012 Rank 55 Aligned Residues 230 % Identity 12% Template c3brzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx Resolution 3.20 Å

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		1754	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.																																									.	1790	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	M	L	A	L	R	K	T	I	D	L	S	E	S	Q	T	M	S	L	E	Y	G	I	A	R	L	D	G	D	G	A	Q	K	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	G	V	T
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	I	V	L	R	A	P	I	G	F	S	Y	Q	A	T	S	K	L	T	F	G	A	S	V	D	L	V	W	T	S	L	N	L	E	L	L	L	P	S	S	Q	V	G	A	L	T	A	Q	G	N	L	S	G	G	L	V	P	S	L	A	G	F	V	G	T	G	G	A	A	H	F	S	L	S	A	G	G	A	V
Template Known Secondary structure																S	S	S	S																															T	T					S						T	T	T	S	G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		1794	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.								.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		G	G	Y	S	Q	F	F	G	L	K	H	Q	M	S	F	D	N	G	M	N	W	N	N	A	L	R	Y	D	V	H	N	L	D	S	S	R	S	I	A	F	G	N	T	.	.	.	.	.	.	.	N	K	T	A	D	T	D	V	K	Q	Q	Y	L	E	F	R	S	E	G	A	K	T	F	E	P	S	E	G	L	K
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	G	W	G	G	R	L	G	L	T	Y	K	L	T	D	N	T	V	L	G	A	M	Y	N	F	K	T	S	V	G	D	L	E	G	K	A	T	L	S	A	I	S	G	D	G	A	V	L	P	L	D	G	D	I	R	V	K	N	F	E	M	P	A	S	L	T	L	G	L	A	H	Q	F	N	E	R	W	V
Template Known Secondary structure																	S	S	S											B																T	T	S																B												S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		1867	.	.	1870	.	.	.		.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	T	P	Y	A	G	V	.	K	L	R	H	T	L	E	G	G	Y	Q	E	R	N	A	G	D	F	N	L	N	M	N	S	G	S	E	T	A	V	D	S	I	V	G	L	K	L	D	Y	A	G	K	D	G	W	S	A	S	A	T	L	E	G	G	P	N	L	S	Y	A	K	S	Q	R	T	A	S	L	A	G	A
Query Conservation									.
Alig confidence									.																																																													.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		V	A	A	D	I	K	R	A	Y	W	G	D	V	M	D	S	M	N	V	A	F	I	S	Q	L	G	G	I	D	V	A	L	P	H	R	Y	Q	D	I	T	V	A	S	I	G	T	A	Y	K	Y	N	N	D	L	T	L	R	A	G	Y	S	Y	A	Q	L	I	L	P	.	.	.	.	.	.	.	V	I	P	A	Y
Template Known Secondary structure												T	T			S									S	S																									S	S	S	S															T	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.
		1946	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.		.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		G	S	Q	H	F	N	V	D	D	G	Q	K	G	G	G	I	N	S	L	T	S	V	G	V	K	Y	S	S	K	.	E	S	S	L	N	L	D	A	Y	N	W	K	E	D	G	I	S	D	K	G	V	M	L	N	F	K	K	T	F
Query Conservation																															.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	R	H	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	G	E	Y	D	F	D	K	D	S	R	I	N	L	A	I	S	F	G	L	R	E	R	V	M	L	R	Q	S	H	S	Q	I	N	A	V	V	S	Y
Template Known Secondary structure			S					.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	S																							B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.														380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions