Job Description P33666 Confidence 26.20% Date Wed Jan 25 15:20:50 GMT 2012 Rank 83 Aligned Residues 60 % Identity 23% Template c2zkra_ PDB info PDB header:ribosomal protein/rna Chain: A: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.												.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.																				.	.	.
Query SS confidence																			.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.																				.	.	.
Query Sequence		K	L	S	P	E	E	L	K	R	L	P	S	E	C	S	P	L	.	.	.	.	.	.	V	E	Q	N	L	M	P	W	L	S	T	G	A	A	.	.	.	.	.	.	.	.	.	.	.	A	L	I	T	A	L	A	V	.	.	V	E	L	N	D	D	D	D	H	H	H	R	N	N	S	P	L	P	P	.	.	.
Query Conservation																			.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.																				.	.	.
Alig confidence																			.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.		.																		.	.	.
Template Conservation																																																													.
Template Sequence		K	L	P	S	G	S	K	K	V	I	S	S	A	N	R	A	V	V	G	V	V	A	G	G	G	R	I	D	K	P	I	L	K	A	G	R	A	Y	H	K	Y	K	A	K	R	N	C	W	P	R	V	R	G	V	A	M	N	P	V	.	H	P	F	G	G	G	N	H	Q	H	I	G	K	P	S	T	I	R	R	D
Template Known Secondary structure				T	T	S							T	T						S		B	S		T	T	T	T	T	S				S										T	S	S				S				G	G	G	S				.		T	T			S	S	S				S	S				B		T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		105	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	A
Template Known Secondary structure				G
Template Predicted Secondary structure
Template SS confidence
		229	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions