Job Description P33666 Confidence 44.99% Date Wed Jan 25 15:20:50 GMT 2012 Rank 41 Aligned Residues 129 % Identity 13% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	E	Y	D	M	L	A	L	R	K	T	I	D	L	S	E	S	Q	T	M	S	L	E	Y	G	I	A	R	L	D	G	D	G	A	Q	K	A	G	D	N	G	V	T	G	G	Y	S	Q	F	F	G	L	K	H	Q	M	S	F	D	N	G	M	N	W	N	N	A	L	R	Y	D	V	H	N	L	D	S	S	R
Query Conservation
Alig confidence																																								.	.	.
Template Conservation																																								.	.	.
Template Sequence		V	L	G	Y	E	G	W	L	A	G	Y	Q	M	N	F	E	T	A	K	S	R	V	T	Q	S	N	F	A	V	G	Y	K	T	D	E	F	Q	L	.	.	.	H	T	N	V	N	D	G	T	E	F	G	G	S	I	Y	Q	K	V	N	K	K	L	E	T	A	V	N	L	A	W	T	A	G	N	S	N	T	R	F
Template Known Secondary structure						T	T											T	T	T	T	S													S	S				.	.	.						T	T	T											S	T	T											T	T	S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		1830	.	.	.	.				.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		S	I	A	F	G	.	.	.	N	T	N	K	T	A	D	T	D	V	K	Q	Q	Y	L	E	F	R	S	E	G	A	K	T	F	E	P	S	E	G	L	K	V	T	P	Y	A	G	V	K	L	R	H	T	L	E	G	G	Y	Q
Query Conservation							.	.	.
Alig confidence							.	.	.																.	.	.
Template Conservation																									.	.	.
Template Sequence		G	I	A	A	K	Y	Q	I	D	P	D	A	C	F	S	A	K	V	N	N	S	S	L	.	.	.	I	G	L	G	Y	T	Q	T	L	K	P	G	I	K	L	T	L	S	A	L	L	D	G	K	N	V	N	A	G	G	H	K
Template Known Secondary structure											T	T									S	S	S		.	.	.										S	S	S										S	T	T		G	G	G	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions