Job Description P33666 Confidence 94.37% Date Wed Jan 25 15:20:50 GMT 2012 Rank 16 Aligned Residues 176 % Identity 11% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		1725	.	.	.	.	1730	.	.	.	.	.	.	.	.		.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.										.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.
Predicted Secondary structure																.																			.	.	.	.	.	.	.	.	.
Query SS confidence																.																			.	.	.	.	.	.	.	.	.
Query Sequence		A	A	P	K	V	G	N	G	L	A	F	N	V	V	.	A	K	G	D	P	R	A	E	L	G	N	N	T	E	Y	D	M	L	.	.	.	.	.	.	.	.	.	A	L	R	K	T	I	D	L	S	E	S	Q	T	M	S	L	E	Y	G	I	A	R	L	D	G	D	G	A	Q	K	A	G	D	N	G	V	T	G
Query Conservation																.																			.	.	.	.	.	.	.	.	.
Alig confidence																.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	A	P	K	D	N	T	W	Y	A	G	G	K	L	G	W	S	Q	Y	H	D	T	G	F	Y	G	N	G	F	Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	L	G	F	E	M	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	F	K
Template Known Secondary structure		S	S		S														S					S						S				S				S																	T	T																		S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		1795	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	S	Q	F	F	G	L	K	H	Q	M	S	F	D	N	G	M	N	W	N	N	A	L	R	Y	D	V	H	N	L	D	S	S	R	S	I	A	F	G	N	T	N	K	T	A	D	T	D	V	K	Q	Q	Y	L	E	F	R	S	E	G	A	K	T	F	E	P	S	E	G	L	K	V	T	P	Y	A	G	V	K
Query Conservation
Alig confidence																																								.	.	.	.																														.	.	.	.	.	.
Template Conservation																																								.	.	.	.																														.	.	.	.	.	.
Template Sequence		A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	.	.	.	.	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	.	.	.	.	.	.	A	T	R
Template Known Secondary structure															S	S	S	S																			S			.	.	.	.		S	S	S																						S	S	S		.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160
		1875	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	T	L	E	G	G	Y	Q	E	R	N	A	G	D	F	N	L	N	M	N	S	G	S	E	T	A	V	D	S	I	V	G	L	K	L	D	Y	A	G	K	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		L	E	Y	Q	W	V	N	N	I	G	D	A	G	T	V	G	T	R	P	D	N	G	M	.	.	.	.	.	.	.	L	S	L	G	V	S	Y	R	F	G	Q	E	D
Template Known Secondary structure					S	S		S	S					S					S	S		S			.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.	.	190	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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