Job Description P33666 Confidence 25.53% Date Wed Jan 25 15:20:50 GMT 2012 Rank 87 Aligned Residues 43 % Identity 26% Template c2j9uB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 36; PDBTitle: 2 angstrom x-ray structure of the yeast escrt-i vps28 c-2 terminus in complex with the nzf-n domain from escrt-ii Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure														.															.	.
Query SS confidence														.															.	.
Query Sequence		Q	G	W	A	A	D	I	T	E	V	E	T	.	T	T	G	E	K	K	N	T	N	V	T	C	P	A	.	.	D	P	G	K	L	S	P	E	E	L	K	R	L	P	S	E	C
Query Conservation														.															.	.
Alig confidence														.															.	.
Template Conservation
Template Sequence		S	T	W	V	C	P	I	C	M	V	S	N	E	T	Q	G	E	F	T	K	D	T	L	P	T	P	I	C	I	N	C	G	V	P	A	D	Y	E	L	T	K	S	S	I	N	C
Template Known Secondary structure							T	T	T							S	S				T	T		S	S			B		T	T	T			B							G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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