Job Description P33666 Confidence 65.20% Date Wed Jan 25 15:20:50 GMT 2012 Rank 28 Aligned Residues 151 % Identity 11% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.							.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		Y	D	V	H	N	L	D	S	S	R	S	I	A	F	G	N	T	N	K	T	A	D	T	.	.	.	.	.	.	D	V	K	Q	Q	Y	L	E	F	R	S	E	G	A	K	T	F	E	P	S	E	G	L	K	V	T	P	Y	A	G	V	K	L	R	H	T	L	E	G	G	Y	Q	E	R	N	A	G	D	F	N	L
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		P	S	V	Y	F	N	A	A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	.	.	.	.	.
Template Known Secondary structure											T	T															T	T	T	T				S																	S	S																	S	S		T	T				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		1894	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.			.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		N	M	N	S	G	S	E	T	A	V	D	S	I	V	G	L	K	L	D	Y	.	.	A	G	K	D	G	W	S	A	S	A	T	L	E	G	G	P	N	L	S	Y	A	K	S	Q	R	T	A	S	L	A	G	A	G	S	Q	H	F	N	V	D	D	G	Q	K	G	G	G	I	N	S	L	T	S	V	G	V	K	Y
Query Conservation																						.	.
Alig confidence		.	.	.	.	.	.	.						.								.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.						.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	N	M	Q	R	.	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y
Template Known Secondary structure		.	.	.	.	.	.	.						.												S	S	S														S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.	.	.	.	.	.	.						.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									107	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																				.	.	.	.	150	.	.	.	.	.	.	.	.	.
		1972		.	.	.	.	.	.	.	1980	.	.	.	.	.	.				.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.
Predicted Secondary structure			.															.	.	.
Query SS confidence			.															.	.	.
Query Sequence		S	.	S	K	E	S	S	L	N	L	D	A	Y	N	W	K	.	.	.	E	D	G	I	S	D	K	G	V	M	L	N	F	K	K	T
Query Conservation			.															.	.	.
Alig confidence			.															.	.	.
Template Conservation
Template Sequence		T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R
Template Known Secondary structure				S	S	S	B														S	S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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