Job Description P33666 Confidence 30.17% Date Wed Jan 25 15:20:50 GMT 2012 Rank 59 Aligned Residues 61 % Identity 26% Template c1kqsA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:ribosomal protein l2; PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.												.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.											.	.	.
Query SS confidence																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.											.	.	.
Query Sequence		K	L	S	P	E	E	L	K	R	L	P	S	E	C	.	.	.	.	.	.	S	P	L	V	E	Q	N	L	M	P	W	L	S	T	G	A	A	.	.	.	.	.	.	.	.	.	.	.	A	L	I	T	A	L	A	V	.	.	V	E	L	N	D	D	D	D	H	H	.	.	.	H	R	N	N	S	P	L	P	P
Query Conservation																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.											.	.	.
Alig confidence																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.											.	.	.
Template Conservation
Template Sequence		K	L	P	S	G	E	M	K	R	L	D	P	Q	C	R	A	T	I	G	V	V	G	G	G	G	R	T	D	K	P	F	V	K	A	G	N	K	H	H	K	M	K	A	R	G	T	K	W	P	N	V	R	G	V	A	M	N	A	V	D	H	P	F	G	G	G	G	R	Q	H	P	G	K	P	K	S	I	S	R	N
Template Known Secondary structure				T	T	S							T	T						S		B	S	S	T	T	G	G	G	S				S									T	T	S	S				S				G	G	G	S		T	T	T		T	T			S	S	S	S			S	S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		105	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	P
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		219	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions