 |
Job Description | P58095 | Confidence | 2.15% | Date | Thu Jan 5 12:06:39 GMT 2012 |
Rank | 69 | Aligned Residues | 25 |
% Identity | 24% | Template | c2i8bB_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:minor nucleoprotein vp30; |
PDBTitle: crystal structure of the c-terminal domain of ebola virus vp30
|
Resolution | 2.00 Å |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | P | Q | W | A | S | A | D | C | V | A | G | P | L | V | S | A | G | I | T | D | I | N | I | E | D | D | Q | G | I | H | V |
Query Conservation |   |
|
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
| . | . | . | . | . | . |
|
|   |   |   |
|   |
|   |
|   |   | . | . |
|
|   |
|
|
|
|   |
|
Template Sequence |   |
G | L | G | Q | . |
. |
. |
. |
. |
. |
D | Q | A | E | P | V | L | E | V | Y | Q | R | . |
. |
L | H | S | D | K | G | G | S | F |
Template Known Secondary structure |   |
T |
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | T |
| S | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
198 | . | 200 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|