Job Description Q57261 Confidence 81.82% Date Thu Jan 5 12:37:16 GMT 2012 Rank 7 Aligned Residues 102 % Identity 16% Template c1sgvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	V	R	I	L	K	N	.	G	C	N	T	R	F	V	A	D	A	L	A	K	F	L	K	I	H	A	R	E	V	S	F	A	G	Q	K	D	K	H	A	V	T	E	Q	W	L	C	A	R	V	P	G	K	E	M	P	D	L	S	A	F	Q	L	E	G	C	Q	V	L	E	Y	A	R	H	K	R	K	L	R	L
Query Conservation									.
Alig confidence									.																		.	.																																																.	.	.
Template Conservation																											.	.																																																.	.	.
Template Sequence		I	V	V	I	D	K	P	A	G	M	T	S	H	D	V	V	G	R	C	R	R	I	F	A	T	.	.	R	R	V	G	H	A	G	T	L	D	P	M	A	T	G	V	L	V	I	G	I	E	R	A	T	K	I	L	G	L	L	T	A	A	P	K	S	Y	A	A	T	I	R	L	G	Q	T	.	.	.	T	S	T
Template Known Secondary structure									T	T														T	T		.	.	S					S	S				T	T										G	G	G	G	G	G	G	G	G	T	T	T	S											T			.	.	.		T	T
Template Predicted Secondary structure																											.	.																																																.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	K	G	N	A	F	T	L	V	L	R	E	V	S	N	R	D	D	V	E	Q	R	L	I	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	A	E	G	Q	V	L	Q	S	V	P	A	K	H	L	T	I	E	A	I	D	A	A	M	E	R	L
Template Known Secondary structure		S	B	T	T	S									T	T													T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions