Job Description Q46907 Confidence 30.13% Date Thu Jan 5 12:35:45 GMT 2012 Rank 99 Aligned Residues 64 % Identity 19% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																								.
Query SS confidence																										.	.	.																								.
Query Sequence		A	S	W	L	A	A	Q	D	F	S	G	C	T	L	A	H	W	Q	I	E	P	Q	P	V	.	.	.	V	A	E	Q	V	L	D	A	L	V	E	Q	W	Q	R	T	P	A	D	V	V	L	F	.	P	P	G	T	F	G	D	E	L	S	T	R	L	A	W	R	L
Query Conservation																										.	.	.																								.
Alig confidence																										.	.	.																								.
Template Conservation
Template Sequence		A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	N	A	I	G	I	N	G	P	N	P	K	T	Q	K	F	Y	K	R	L	Q	E	V	L
Template Known Secondary structure										T	T	S										S		T	T		S	S		S																	S							S	S	T
Template Predicted Secondary structure
Template SS confidence
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions