Return to main results Retrieve Phyre Job Id

Job DescriptionQ46907
Confidence96.63%DateThu Jan 5 12:35:45 GMT 2012
Rank34Aligned Residues120
% Identity20%Templatec3lq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene2 1-carboxylic acid synthase/2-oxoglutarate decarboxylase3 from listeria monocytogenes str. 4b f2365
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170....... ..180.........190.........200.........210.. .......220... ......230..
Predicted Secondary structure 




.









..






.........
Query SS confidence 












.


































. .










. . . . . . . . .








Query Sequence  LAEARRVLVVGQG. GEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEK. . VIGISGHLLAP. . . . . . . . . EVCIVVGAS
Query Conservation 
  
 


  


.  
      


  





 


 

 

 
   ..






 
 
......... 



 


Alig confidence 












.





















.











..










.........








Template Conservation        


 

     
   
  


 
  

  
.                
  
             

 

 

  
Template Sequence  CTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILAD. PLSGLRSYGALDEVVIDQYDAFLKEAEIIDKLTPEVVIRFGSM
Template Known Secondary structure  TTTS

S


TT
T


.GGGSTTSBSS

SS

TTST

SSS
Template Predicted Secondary structure 










.





























Template SS confidence 















































































   219220.........230.........240.........250.... .....260.........270.........280.........290.......
 
   233 ......240.........250....... ..260.........270.........280.....
Predicted Secondary structure 
...









.





Query SS confidence 
. . .























.



























Query Sequence  G. . . AAALMAGVRNSKFVVAINHDASAA. VFSQADVGVVDDWKVVLEALVTNIHADC
Query Conservation 
...



  

  
  




 

 

.

  







  



 

  
 
  
Alig confidence 
...























.



























Template Conservation                    
 

               
  
    
  
        
Template Sequence  PVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNMPDDA
Template Known Secondary structure 
S


SS
TT




TT


S
S
S
STT
Template Predicted Secondary structure 


































Template SS confidence 
























































   298.300.........310.........320.........330.........340.........350....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions