Job Description Q46907 Confidence 85.77% Date Thu Jan 5 12:35:45 GMT 2012 Rank 58 Aligned Residues 109 % Identity 15% Template c2w93A_ PDB info PDB header:lyase Chain: A: PDB Molecule:pyruvate decarboxylase isozyme 1; PDBTitle: crystal structure of the saccharomyces cerevisiae pyruvate2 decarboxylase variant e477q in complex with the surrogate3 pyruvamide Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.		170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.									.	.																																				.	.	.	.	.	.								.	.	.	.	.	.
Query SS confidence							.									.	.																																				.	.	.	.	.	.								.	.	.	.	.	.
Query Sequence		L	A	E	A	R	.	R	V	L	V	V	G	Q	G	.	.	G	E	A	D	N	Q	E	I	A	M	L	A	E	K	L	G	A	E	V	G	Y	S	R	A	R	V	M	N	G	G	V	D	A	E	K	.	.	.	.	.	.	V	I	G	I	S	G	H	.	.	.	.	.	.	L	L	A	P	E	V	C	I	V	V
Query Conservation							.									.	.																																				.	.	.	.	.	.								.	.	.	.	.	.
Alig confidence							.									.	.																										.	.									.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																																											.	.
Template Sequence		V	K	D	A	K	N	P	V	I	L	A	D	A	C	C	S	R	H	D	V	K	A	E	T	K	K	L	I	D	L	T	Q	F	P	A	F	V	T	P	M	G	.	.	K	G	S	I	D	E	Q	H	P	R	Y	G	G	V	Y	V	G	T	L	S	K	P	E	V	K	E	A	V	E	S	A	D	L	I	L	S	V
Template Known Secondary structure						S	S												T	T																				T	T	T	.	.	T	T	S	S		T	T	S	T	T							G	G	G	S										T		S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		G	A	S	G	A	A	A	L	M	A	G	V	R	N	S	K	F	V	V	A	I	N	H	D	A	S	A	A	V	.	F	S	Q	A	D	V	G	V	V	D	D	W	K	V	V	L	E	A	L	V	T	N	I	H	A	D	C	Q
Query Conservation																															.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	A	L	T	K	N	I	V	E	F	H	S	D	H	M	K	I	R	N	A	T	F	P	G	V	Q	M	K	F	V	L	Q	K	L	L	T	N	I	A	D	A	A	K	G	Y	K	P
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.											S	S					T	T					T																		T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286												.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions