Job Description Q46907 Confidence 78.61% Date Thu Jan 5 12:35:45 GMT 2012 Rank 61 Aligned Residues 117 % Identity 12% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		165	.	.	.	.		170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.							.	.	.	.	.	.	.
Predicted Secondary structure							.									.	.																																				.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence							.									.	.																																				.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		L	A	E	A	R	.	R	V	L	V	V	G	Q	G	.	.	G	E	A	D	N	Q	E	I	A	M	L	A	E	K	L	G	A	E	V	G	Y	S	R	A	R	V	M	N	G	G	V	D	A	E	K	.	.	.	.	.	.	V	I	G	I	S	G	H	L	L	A	.	.	.	.	.	.	P	E	V	C	I	V	V
Query Conservation							.									.	.																																				.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence							.									.	.																										.	.									.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																											.	.
Template Sequence		L	K	N	A	Q	K	P	V	V	I	A	G	H	E	V	I	S	F	G	L	E	K	T	V	T	Q	F	V	S	E	T	K	L	P	I	T	T	L	N	F	G	.	.	K	S	A	V	D	E	S	L	P	S	F	L	G	I	Y	N	G	K	L	S	E	I	S	L	K	N	F	V	E	S	A	D	F	I	L	M	L
Template Known Secondary structure						S	S												T	T													T							S	T	T	.	.	T	T	S	S		T	T	S	T	T							G	G	G	S												S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		G	A	.	.	.	S	G	A	A	A	L	M	A	G	V	R	N	S	K	F	V	V	A	I	N	H	D	A	S	A	A	V	F	S	Q	A	D	V	G	V	V	D	D	W	K	V	V	L	E	A	L	V	T	N	I	H	A	D	C	Q
Query Conservation				.	.	.
Alig confidence				.	.	.																									.	.	.
Template Conservation																															.	.	.
Template Sequence		G	V	K	L	T	D	S	S	T	G	A	F	T	H	H	L	D	E	N	K	M	I	S	L	N	I	D	E	G	.	.	.	I	I	F	N	K	V	V	E	D	F	D	F	R	A	V	V	S	S	L	S	E	L	K	G	I	E	Y	E
Template Known Secondary structure		S					G	G	G	T	T	T	T						G	G	G						S	S			.	.	.			T	T					S	S							T	T	G	G	G			S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions