Job Description Q46907 Confidence 37.93% Date Thu Jan 5 12:35:45 GMT 2012 Rank 87 Aligned Residues 42 % Identity 24% Template c2p3wB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) Resolution 1.70 Å

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Show / Hide Conservation and Alignment quality

		213	.	.	.	.	.	.	220	.	.	.	.											.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	G	I	S	G	H	L	L	A	P	E	.	.	.	.	.	.	.	.	.	.	V	C	I	V	V	G	A	S	G	A	A	A	L	M	A	G	V	R	N	S	K	F	V	V	A	I	N	H	D	A
Query Conservation														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	G	I	R	M	R	T	I	T	P	S	L	V	D	E	P	E	V	S	S	G	I	Y	V	Q	E	V	A	P	N	S	P	S	Q	R	G	G	I	Q	D	G	D	I	I	V	K	V	N	G	R	P
Template Known Secondary structure																						S	S								S	S	S						T			T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions