Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7R9
Confidence100.00%DateThu Jan 5 11:06:06 GMT 2012
Rank2Aligned Residues116
% Identity54%Templated2uubk1
SCOP infoRibonuclease H-like motif Translational machinery components Ribosomal protein L18 and S11
Resolution2.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPG
Query Conservation     
  




  
 


 




  
      
 
  


  

 
  

   
     
    


 
 
  

 
 
Alig confidence 















































































Template Conservation 
  
  




  
 


 




  
      
 
  


   
 
  

   
  
  
    


 
 
   
 
 
Template Sequence  KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAG
Template Known Secondary structure 



S
SS

TTS
TTTSS

SGGGGSTTT




TT
Template Predicted Secondary structure 


































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   93......100.........110.........120........
Predicted Secondary structure 


















Query SS confidence 



































Query Sequence  RESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRR
Query Conservation 
   

 
      
  
 
 
  





  
 

Alig confidence 



































Template Conservation 
   

 
      
  
 
 
 

 




 
 

Template Sequence  REQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR
Template Known Secondary structure  TSSS

B




SS
S


GGG
Template Predicted Secondary structure 


















Template SS confidence 



































   91........100.........110.........120......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions