Job Description P0A7R9 Confidence 73.91% Date Thu Jan 5 11:06:06 GMT 2012 Rank 14 Aligned Residues 99 % Identity 21% Template c4a1aM_ PDB info PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l5; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. Resolution 3.52 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	G	V	A	H	I	H	A	S	F	N	N	T	I	V	T	I	T	.	.	D	R	Q	G	.	N	A	L	G	W	A	T	A	G	G	S	G	F	R	G	S	R	.	.	K	S	T	P	F	A	A	Q	V	A	A	E	R	C	A	D	A	V	K	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.					.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	Y	R	L	V	A	R	A	T	N	T	R	I	I	A	Q	I	V	Y	A	T	L	K	C	D	R	V	L	C	A	A	D	S	Y	E	L	K	R	F	G	V	S	T	G	L	A	S	Y	A	A	A	Y	A	T	G	L	L	L	A	R	R	L	L	K	Q	I	G	L	D	T	V	Y	A	G	Q	T	K	V	D
Template Known Secondary structure												S	S											S	S										T	T					T	T			S		T	T	S																				T		T	T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
																			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	N	L	E	V	M	V	K	G	P	G	P	G	R	E	S	T	I	R	A	L	N	A	A	G	F	R	I	T	N	I	T	D	V	T	P	I	P	H	N	G	C	R	P	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	Y	F	N	V	D	E	D	Q	K	E	K	K	P	F	K	A	I	L	D	A	G	L	V	R	T	T	T	G	N	R	V	F	G	V	L	K	G	A	C	D	G	G	I	N	I	.	.	.	.	.	.	.	.	.	P	H	S	E	S	R	F	P
Template Known Secondary structure			S				G	G	G	T			S	S				B						T	T	S				S	S													T	T		B		.	.	.	.	.	.	.	.	.				S	S	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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