Job Description P0A7R9 Confidence 65.60% Date Thu Jan 5 11:06:06 GMT 2012 Rank 17 Aligned Residues 106 % Identity 18% Template c3izcQ_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:60s ribosomal protein rpl5 (l18p); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.
Predicted Secondary structure																												.	.					.																		.	.																				.								.
Query SS confidence																												.	.					.																		.	.																				.								.
Query Sequence		K	R	V	R	K	Q	V	S	D	G	V	A	H	I	H	A	S	F	N	N	T	I	V	T	I	T	.	.	D	R	Q	G	.	N	A	L	G	W	A	T	A	G	G	S	G	F	R	G	S	R	.	.	K	S	T	P	F	A	A	Q	V	A	A	E	R	C	A	D	A	V	K	.	E	Y	G	I	K	N	L	.
Query Conservation																												.	.					.																		.	.																				.								.
Alig confidence																												.	.					.																		.	.																				.								.
Template Conservation
Template Sequence		H	K	A	K	Y	N	T	P	K	Y	R	L	V	V	R	F	T	N	K	D	I	I	C	Q	I	I	S	S	T	I	T	G	D	V	V	L	A	A	A	Y	S	H	E	L	P	R	Y	G	I	T	H	G	L	T	N	W	A	A	A	Y	A	T	G	L	L	I	A	R	R	T	L	Q	R	L	G	L	D	E	T	Y
Template Known Secondary structure		T	S								S		S	S	S		S	S	S	S											S	S	S									S	S	S					S			S		S	S	S																	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
																										83	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	M	V	K	G	.	.	.	.	.	P	G	P	G	R	E	S	T	I	R	A	L	N	A	A	G	F	R	I	T	N	I	T	D	V	T	P	I	P	H	N	G	C	R	P	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		K	G	V	E	E	V	E	G	E	Y	E	L	T	E	A	V	E	D	G	P	R	P	F	K	V	F	L	D	I	G	L	Q	R	T	T	T	G	A	R	V	F	G	A	L	K	G	A	S	D	G	G	L	Y	V	.	.	.	.	.	.	.	.	.	P	H	S	E	N	R	F	P
Template Known Secondary structure		T	T	T	S				S				S	S				S	S	T	T			B	S						T	T					S	S												T	T	T		B		.	.	.	.	.	.	.	.	.				T	T	T	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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